ID   A0A0D3D4H1_BRAOL        Unreviewed;       635 AA.
AC   A0A0D3D4H1;
DT   29-APR-2015, integrated into UniProtKB/TrEMBL.
DT   29-APR-2015, sequence version 1.
DT   08-NOV-2023, entry version 18.
DE   RecName: Full=Retrotransposon gag domain-containing protein {ECO:0008006|Google:ProtNLM};
OS   Brassica oleracea var. oleracea.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX   NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo7g029100.1, ECO:0000313|Proteomes:UP000032141};
RN   [1] {ECO:0000313|EnsemblPlants:Bo7g029100.1, ECO:0000313|Proteomes:UP000032141}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX   PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA   Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA   Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA   Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA   Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA   Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA   Chalhoub B., Sharpe A.G.;
RT   "Transcriptome and methylome profiling reveals relics of genome dominance
RT   in the mesopolyploid Brassica oleracea.";
RL   Genome Biol. 15:R77-R77(2014).
RN   [2] {ECO:0000313|EnsemblPlants:Bo7g029100.1}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (MAR-2015) to UniProtKB.
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DR   AlphaFoldDB; A0A0D3D4H1; -.
DR   EnsemblPlants; Bo7g029100.1; Bo7g029100.1; Bo7g029100.
DR   Gramene; Bo7g029100.1; Bo7g029100.1; Bo7g029100.
DR   eggNOG; KOG0017; Eukaryota.
DR   HOGENOM; CLU_431085_0_0_1; -.
DR   Proteomes; UP000032141; Chromosome C7.
DR   CDD; cd00303; retropepsin_like; 1.
DR   Gene3D; 2.40.70.10; Acid Proteases; 1.
DR   InterPro; IPR021109; Peptidase_aspartic_dom_sf.
DR   PANTHER; PTHR33240:SF8; H0502G05.11 PROTEIN; 1.
DR   PANTHER; PTHR33240; OS08G0508500 PROTEIN; 1.
DR   SUPFAM; SSF50630; Acid proteases; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000032141}.
FT   REGION          1..28
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          50..160
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          240..296
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          342..384
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          558..622
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        67..81
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        82..104
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        106..160
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        240..275
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        282..296
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        368..384
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        558..603
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   635 AA;  70708 MW;  8A2E49F30206E96D CRC64;
     MTNDDGNILQ TPLNVESNTN LNTPAADVSA ANTPAIAATL EEFKKMFATY EKRKDSSNPS
     LGNQKGLREK TRFRNRSGTL REKHSGQAPS KTASVENQDS ENPPSPAKGV EDDEFERINL
     DPSDHFDDSE EDADVHPRRT RSQAAREDSP FSKPMTEEEE NIFWVEQEKL AEEQAAITCS
     KRRQGRKTAE ESPDIRNLRD YIKKTVAEWI SLDKPQTIQD ALHMATDYIM IEEEMKLLSQ
     KHKPTKGSSK DVDQKPRKKN PRNEKYAHHE GEELQGAHNY AINPEQGRTS GNTWTRNPAY
     DENTFCEFHQ TRGHSTTNCK VLGARLDAKL LAGELSEVTS VKNLVRDSDR PPKIDKNPPA
     ENSPQRNQSG DKRGRRHDEK GNDINRCRIN MIVGGSQYCN DTAEGAGGID QPHCDPLVID
     LVIRDLEVAR VLIDTGSTVN VIFRDTLKMM NVELEEVVPT PKQLTGFSGE TSMTLGSIQL
     PVMAKEVTKN IDFAVVDHPA IYNVIMGTPW INAMKAVPST YHLGVKFPTQ KGITAIWGCQ
     KQSRLRFLAE HKLRQATTTT MTKRKRTKIT LSSAENTSMK DDLASSAEAT SSDIKNQHDS
     EANATSQPEE KNPEEDVDAA TVCAAKAVDA TLTAD
//