ID A0A0D3EIE6_BRAOL Unreviewed; 582 AA.
AC A0A0D3EIE6;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 42.
DE RecName: Full=Homeobox domain-containing protein {ECO:0000259|PROSITE:PS50071};
GN Name=106312940 {ECO:0000313|EnsemblPlants:Bo9g184860.1};
OS Brassica oleracea var. oleracea.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo9g184860.1, ECO:0000313|Proteomes:UP000032141};
RN [1] {ECO:0000313|EnsemblPlants:Bo9g184860.1, ECO:0000313|Proteomes:UP000032141}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. TO1000 {ECO:0000313|Proteomes:UP000032141};
RX PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA Chalhoub B., Sharpe A.G.;
RT "Transcriptome and methylome profiling reveals relics of genome dominance
RT in the mesopolyploid Brassica oleracea.";
RL Genome Biol. 15:R77-R77(2014).
RN [2] {ECO:0000313|EnsemblPlants:Bo9g184860.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|PROSITE-ProRule:PRU00108}.
CC -!- SIMILARITY: Belongs to the TALE/BELL homeobox family.
CC {ECO:0000256|ARBA:ARBA00006454}.
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DR RefSeq; XP_013606099.1; XM_013750645.1.
DR AlphaFoldDB; A0A0D3EIE6; -.
DR SMR; A0A0D3EIE6; -.
DR STRING; 109376.A0A0D3EIE6; -.
DR EnsemblPlants; Bo9g184860.1; Bo9g184860.1; Bo9g184860.
DR GeneID; 106312940; -.
DR Gramene; Bo9g184860.1; Bo9g184860.1; Bo9g184860.
DR KEGG; boe:106312940; -.
DR eggNOG; KOG0773; Eukaryota.
DR HOGENOM; CLU_011058_3_1_1; -.
DR OMA; YNGLATH; -.
DR OrthoDB; 468484at2759; -.
DR Proteomes; UP000032141; Chromosome C9.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00086; homeodomain; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR001356; Homeobox_dom.
DR InterPro; IPR008422; Homeobox_KN_domain.
DR InterPro; IPR006563; POX_dom.
DR PANTHER; PTHR11850:SF404; HOMEOBOX DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR11850; HOMEOBOX PROTEIN TRANSCRIPTION FACTORS; 1.
DR Pfam; PF05920; Homeobox_KN; 1.
DR Pfam; PF07526; POX; 1.
DR SMART; SM00389; HOX; 1.
DR SMART; SM00574; POX; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR PROSITE; PS50071; HOMEOBOX_2; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00108};
KW Homeobox {ECO:0000256|ARBA:ARBA00023155, ECO:0000256|PROSITE-
KW ProRule:PRU00108};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW ProRule:PRU00108}; Reference proteome {ECO:0000313|Proteomes:UP000032141}.
FT DOMAIN 363..404
FT /note="Homeobox"
FT /evidence="ECO:0000259|PROSITE:PS50071"
FT DNA_BIND 365..405
FT /note="Homeobox"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00108"
FT REGION 413..479
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 415..479
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 582 AA; 62719 MW; 16779FA6352EF0A5 CRC64;
MADAYEPYHV LQQSRRDKLR IPSLDSHFHF HHPHPPSSSG GGAGVYPLGD SDYLAAGGFH
SNNNSHISNP SYSNFMGFLG GPSSSSSNAV AVAGDHSFHD GLSSGDVLVF KPEPLSLSLS
SHPRLTYDLV VPGVVNSGFG RSAAEAAAAT VTVASRSSGP LGPFTGYASI LKGSRFLKPA
QILLDEFCNV GHGIYTDEDD SSLLFDPTVE SLCGTSDSGG GEYMKNKSKL ISMLDEVYKR
YKQYYEQLQA VMGSFECVAG LGHAAPYASL TLKALSRHFK CLKNAITEQL QFSTNNKIQQ
QQSGHLMISE NRTESMRFGG SDSSRGLCSS GQRHGFPDNH APVWRPHRGL PERAVTVLRA
WLFDHFLHPY PTDTDKLMLA KQTGLSRNQV SNWFINARVR VWKPMVEEIH MLETRQSQRS
SSSSWRDERN TTTVFPDNNN PSSSTAQQRA NNNSSPARRV QNDDVHGTTT NNNSNNFMNA
GNSGSGGAVA FSYGIASSNV AGMSSSTNGG VSLTLGLHHQ IGLPEPFPMT TAQRFGLEGG
SSGGGGESYG GGGGGGYEVQ NRQFGRDFIG CSNPQFLHDF VG
//
