ID A0A0D3EJQ3_9ORYZ Unreviewed; 1014 AA.
AC A0A0D3EJQ3;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 27-MAR-2024, entry version 30.
DE RecName: Full=Pentatricopeptide repeat-containing protein {ECO:0008006|Google:ProtNLM};
OS Oryza barthii.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=65489 {ECO:0000313|EnsemblPlants:OBART01G03510.1};
RN [1] {ECO:0000313|EnsemblPlants:OBART01G03510.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 105608 {ECO:0000313|EnsemblPlants:OBART01G03510.1};
RX DOI=10.1007/s12284-009-9025-z;
RA Rounsley S., Marri P.R., Yu Y., He R., Sisneros N., Goicoechea J.L.,
RA Lee S.J., Angelova A., Kudrna D., Luo M., Affourtit J., Desany B.,
RA Knight J., Niazi F., Egholm M., Wing R.A.;
RT "De novo next generation sequencing of plant genomes.";
RL Rice 2:35-43(2009).
RN [2] {ECO:0000313|EnsemblPlants:OBART01G03510.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR AlphaFoldDB; A0A0D3EJQ3; -.
DR STRING; 65489.A0A0D3EJQ3; -.
DR PaxDb; 65489-OBART01G03510-1; -.
DR EnsemblPlants; OBART01G03510.1; OBART01G03510.1; OBART01G03510.
DR Gramene; OBART01G03510.1; OBART01G03510.1; OBART01G03510.
DR eggNOG; KOG1754; Eukaryota.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_10_1; -.
DR Proteomes; UP000026960; Chromosome 1.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 6.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 15.
DR PANTHER; PTHR47939; MEMBRANE-ASSOCIATED SALT-INDUCIBLE PROTEIN-LIKE; 1.
DR PANTHER; PTHR47939:SF14; OS03G0201400 PROTEIN; 1.
DR Pfam; PF01535; PPR; 3.
DR Pfam; PF12854; PPR_1; 2.
DR Pfam; PF13041; PPR_2; 6.
DR SUPFAM; SSF81901; HCP-like; 1.
DR PROSITE; PS51375; PPR; 16.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000026960};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT REPEAT 197..231
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 232..266
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 267..301
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 337..371
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 372..406
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 407..441
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 442..476
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 477..511
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 512..546
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 582..616
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 617..651
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 652..686
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 687..721
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 756..790
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 791..825
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 826..860
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 1014 AA; 112986 MW; C15F958F60DCD2A8 CRC64;
MVKLLADILH HTPPSTWPSA LAAPLLRGRL AAAHVSSLLL LPPSLSRPDL SRRFLLLLPP
HLVSPVSLSL LALSFLSSSP SSSSSSFSSR HAASLLLSLA SSAPSASSSF SSLSHASSLS
AFPPGAASTA AALLASSYLR LRRARDAAAV LGLSLSSGIT VNQYTASQIL FSLVKIRQFA
LARDLFDKML QSGVHLDEYV YTAGIRAYCE SRNLDGARGL VVRMESEGVK ASAVPYNVLM
YGLCKNMRVQ EAVEVKNVMV NIGVTADEVT YRTLVYGFCR MEELEMALRI THDMIRLGFV
PSEANCSFMI DELRKKELVE EAFSLACKLG DLGMVPNVFA YNALIDKLCK NERFDDADRL
FKEMAGRGLE PNEVTYAILI HALCKRGMIE DALCLFDKMR DKGIKVTVYP YNSLINGYCK
QGSLDRARGL LSGMVKEGLT PTAASYSPLI AGLCRNGDLS SAMELHREMA ERGIAWNNYT
FTALLNGFCK DKKMDEAARL FDKMIDSNVI PNEVTFNVMI EGYCLVGNIR KAFQLYDQMV
EMGLKPDNYT YRSLISGLCL TSGVSKANEF VADLENSYAV LNNFSLTALL YGFFREGRFT
ETYHLWDEMA VRGVKLDLVS FTIIVYAALK QHDKEKSCVL FREMKEQGVK PDDIFYTCMI
DALSKEENMI QALNCWDQMV VDGYSPNTVT HTVLINNLCK SGYLGSAELL CKEMLAGNVL
PNKFTYNCFL DYFATEGDME KAKDLHSAML QGHLASIVSF NILIKGLCKA GKIQEAIDLM
SKITESGFSP DCISYSTIIH ELCKMGDINK AFELWNEMLY KGLKPDVVAY NIFIRWCNVH
GESDKALGIY TNMIRSGVQP NWDTYRALLS GISLMLHYDF SCFRGTKQYI QISVYELMDS
THNKSHRRIW FVDDHKSGEI ILEFDGRLNK WGVISFRSDV KVKKLSPGPQ VSFPTHQSGY
MPTSPSLLLP VPWIMIHERG KEKAYGRKCS GILLTERFIL DDTSITVSGF VYMQ
//