ID A0A0D5YPJ3_9FLAO Unreviewed; 304 AA.
AC A0A0D5YPJ3;
DT 27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT 27-MAY-2015, sequence version 1.
DT 24-JAN-2024, entry version 31.
DE SubName: Full=N utilization substance protein B {ECO:0000313|EMBL:AKA34137.1};
GN ORFNames=VC82_457 {ECO:0000313|EMBL:AKA34137.1};
OS Allomuricauda lutaonensis.
OC Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC Flavobacteriaceae; Allomuricauda.
OX NCBI_TaxID=516051 {ECO:0000313|EMBL:AKA34137.1, ECO:0000313|Proteomes:UP000032726};
RN [1] {ECO:0000313|EMBL:AKA34137.1, ECO:0000313|Proteomes:UP000032726}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CC-HSB-11 {ECO:0000313|EMBL:AKA34137.1,
RC ECO:0000313|Proteomes:UP000032726};
RA Kim K.M.;
RT "Complete genome sequence of Muricauda lutaonensis CC-HSB-11T, isolated
RT from a coastal hot spring.";
RL Submitted (MAR-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the NusB family.
CC {ECO:0000256|ARBA:ARBA00005952}.
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DR EMBL; CP011071; AKA34137.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0D5YPJ3; -.
DR STRING; 516051.VC82_457; -.
DR KEGG; mlt:VC82_457; -.
DR PATRIC; fig|516051.4.peg.474; -.
DR HOGENOM; CLU_058797_0_0_10; -.
DR Proteomes; UP000032726; Chromosome.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006353; P:DNA-templated transcription termination; IEA:InterPro.
DR GO; GO:0031564; P:transcription antitermination; IEA:UniProtKB-KW.
DR Gene3D; 1.10.940.10; NusB-like; 1.
DR InterPro; IPR035926; NusB-like_sf.
DR InterPro; IPR011605; NusB_fam.
DR InterPro; IPR006027; NusB_RsmB_TIM44.
DR NCBIfam; TIGR01951; nusB; 1.
DR PANTHER; PTHR11078:SF3; ANTITERMINATION NUSB DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR11078; N UTILIZATION SUBSTANCE PROTEIN B-RELATED; 1.
DR Pfam; PF01029; NusB; 1.
DR SUPFAM; SSF48013; NusB-like; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000032726};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription antitermination {ECO:0000256|ARBA:ARBA00022814};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 196..288
FT /note="NusB/RsmB/TIM44"
FT /evidence="ECO:0000259|Pfam:PF01029"
SQ SEQUENCE 304 AA; 35632 MW; 3FD6EA1DD664CCC0 CRC64;
MQCIYALIQS QDESLDKQKK FLKYSIDSMY VLYLLLLDLM SEVHKMAEKH VQHASKKYLA
TEEDNYPNKE KFINNHLLRQ IVDNQALRQE LSKRKLKAWD LNDEYVKIIY KEVVGSQLYI
DYMNDEGDGY EKDKEFLISL YKTIIAPNEK IYEFFEDYKL TWVDDFPIVN TFLVKRMGKA
KPGVGDKYFL PRLLKDDDDM VFADELLTKT LLNDAEWEKE IEGKTPNWDN DRIAEIDSIL
LKMAICELLN FPSIPEKVTL NEYLEIAKEY STPKSSIFIN GVLDKLVKEY KASGKLQKVG
RGLL
//
