ID   A0A0E0BAW1_9ORYZ        Unreviewed;       885 AA.
AC   A0A0E0BAW1;
DT   27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT   27-MAY-2015, sequence version 1.
DT   27-MAR-2024, entry version 36.
DE   RecName: Full=HRDC domain-containing protein {ECO:0000259|PROSITE:PS50967};
OS   Oryza glumipatula.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX   NCBI_TaxID=40148 {ECO:0000313|EnsemblPlants:OGLUM10G10850.1};
RN   [1] {ECO:0000313|EnsemblPlants:OGLUM10G10850.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Wing R.A., Panaud O., Oliveira A.C.;
RT   "Oryza genome evolution.";
RL   Submitted (AUG-2013) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EnsemblPlants:OGLUM10G10850.1}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (APR-2015) to UniProtKB.
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DR   AlphaFoldDB; A0A0E0BAW1; -.
DR   STRING; 40148.A0A0E0BAW1; -.
DR   EnsemblPlants; OGLUM10G10850.1; OGLUM10G10850.1; OGLUM10G10850.
DR   Gramene; OGLUM10G10850.1; OGLUM10G10850.1; OGLUM10G10850.
DR   eggNOG; KOG2206; Eukaryota.
DR   HOGENOM; CLU_010129_4_1_1; -.
DR   Proteomes; UP000026961; Unassembled WGS sequence.
DR   GO; GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
DR   GO; GO:0000175; F:3'-5'-RNA exonuclease activity; IEA:InterPro.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0000166; F:nucleotide binding; IEA:InterPro.
DR   GO; GO:0000467; P:exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IEA:InterPro.
DR   Gene3D; 1.10.150.80; HRDC domain; 1.
DR   Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR   InterPro; IPR002562; 3'-5'_exonuclease_dom.
DR   InterPro; IPR010997; HRDC-like_sf.
DR   InterPro; IPR002121; HRDC_dom.
DR   InterPro; IPR044876; HRDC_dom_sf.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR036397; RNaseH_sf.
DR   InterPro; IPR045092; Rrp6-like.
DR   PANTHER; PTHR12124; POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED; 1.
DR   PANTHER; PTHR12124:SF73; PROTEIN RRP6-LIKE 2; 1.
DR   Pfam; PF01612; DNA_pol_A_exo1; 1.
DR   Pfam; PF00570; HRDC; 1.
DR   SMART; SM00474; 35EXOc; 1.
DR   SMART; SM00341; HRDC; 1.
DR   SUPFAM; SSF47819; HRDC-like; 1.
DR   SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR   PROSITE; PS50967; HRDC; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000026961}.
FT   DOMAIN          460..540
FT                   /note="HRDC"
FT                   /evidence="ECO:0000259|PROSITE:PS50967"
FT   REGION          1..24
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          146..175
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          563..586
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          707..885
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        729..750
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        759..773
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        777..796
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        797..847
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        848..885
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   885 AA;  97469 MW;  F65418104334AD39 CRC64;
     MEEADDAPPP WRPSKPAAAI DGSSGPLAAA AARLSGRSRA LPSSRDFHFY NNFPSFRSPV
     GAAAARAGAS LAALGAAPFY PKRHPPFPGD DLDDAQDWVV GVIDDLAEQF GASMDEFKAA
     REEEEATGRR ATEEDGFQVV YGKKKKKVMG GGGGEEGVGR GGEAFGGGSG SVKMATRDKS
     AAPGAKAKVP FHIPTIPRPQ DVHRILVDNS SKPFEHSWLE KSDDGSRVVH PLEKIPMEQL
     VDRDFPESEP IKPPALDDTP FTHVEDLKSL EVLATKLKSA TEFAVDLEHN HYRSFQGLTC
     LMQISTRTED FIVDTLKLRK YLGDYLREIF KDPTKKKVMH GADRDIIWLQ RDFGIYVCNL
     FDTGQASRIL QMDRNSLEHL LHHFCGVTAN KEYAREDTHY LLYIYDLMRL RLVKESSDEN
     DLLLEVYKRS KEICLQLYEK ELLTHSSYLY IHGLKENEFD ARQLSVLANI YKWRDSVARG
     EDESTGYILP NKTLLEIAKQ MPATTGRLKR IVKSKNSYLE RHLGHVISTI RSAIANCDAF
     ESIAEQLKKG RLEELAVANM KSNDGDTEMV PADDGNNDDD NVGPSDEHGA VASVENVGAA
     SHCIGNVTSG ASSVNVQLEN PAETKSLGIL SGVSGQDMEV LSNGDRKQVA KATVQVSKRP
     TAFGALLGKP TSGRRQNLFS GFSSGQNKVD KIKSSVALPF HNFCGGAKSP ATSIPLEESV
     RPEPESIQYS DPACQTEDVI QLGTETDGPQ PPENHNEDGQ GHLVPDDMEM SRSPPEHSSA
     GAKQRFQSLN ESRNQQQNHK PHQEPEFNHQ LKPFDYAEAR KNITFGERKA ERIKDNAVAR
     AINKDSGDKG RTSNQFGAGE NEGNRQNPRG RQAFPPSGNR SATYH
//