ID A0A0E0QD82_ORYRU Unreviewed; 606 AA.
AC A0A0E0QD82;
DT 27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT 27-MAY-2015, sequence version 1.
DT 27-MAR-2024, entry version 31.
DE RecName: Full=XPG-I domain-containing protein {ECO:0008006|Google:ProtNLM};
OS Oryza rufipogon (Brownbeard rice) (Asian wild rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4529 {ECO:0000313|EnsemblPlants:ORUFI08G00110.1, ECO:0000313|Proteomes:UP000008022};
RN [1] {ECO:0000313|Proteomes:UP000008022}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. W1943 {ECO:0000313|Proteomes:UP000008022};
RA Zhao Q.;
RL Submitted (JUN-2013) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:ORUFI08G00110.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (JUN-2015) to UniProtKB.
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC Evidence={ECO:0000256|ARBA:ARBA00001946};
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DR AlphaFoldDB; A0A0E0QD82; -.
DR EnsemblPlants; ORUFI08G00110.1; ORUFI08G00110.1; ORUFI08G00110.
DR Gramene; ORUFI08G00110.1; ORUFI08G00110.1; ORUFI08G00110.
DR HOGENOM; CLU_013777_2_1_1; -.
DR Proteomes; UP000008022; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0004518; F:nuclease activity; IEA:UniProtKB-KW.
DR CDD; cd09900; H3TH_XPG-like; 1.
DR CDD; cd09869; PIN_GEN1; 1.
DR Gene3D; 1.10.150.20; 5' to 3' exonuclease, C-terminal subdomain; 1.
DR Gene3D; 3.40.50.1010; 5'-nuclease; 1.
DR InterPro; IPR036279; 5-3_exonuclease_C_sf.
DR InterPro; IPR008918; HhH2.
DR InterPro; IPR029060; PIN-like_dom_sf.
DR InterPro; IPR006086; XPG-I_dom.
DR InterPro; IPR006084; XPG/Rad2.
DR InterPro; IPR006085; XPG_DNA_repair_N.
DR PANTHER; PTHR11081:SF54; FI23547P1; 1.
DR PANTHER; PTHR11081; FLAP ENDONUCLEASE FAMILY MEMBER; 1.
DR Pfam; PF00867; XPG_I; 1.
DR Pfam; PF00752; XPG_N; 1.
DR PRINTS; PR00853; XPGRADSUPER.
DR SMART; SM00279; HhH2; 1.
DR SMART; SM00484; XPGI; 1.
DR SMART; SM00485; XPGN; 1.
DR SUPFAM; SSF47807; 5' to 3' exonuclease, C-terminal subdomain; 1.
DR SUPFAM; SSF88723; PIN domain-like; 1.
PE 4: Predicted;
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Magnesium {ECO:0000256|ARBA:ARBA00022842};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Reference proteome {ECO:0000313|Proteomes:UP000008022}.
FT DOMAIN 1..98
FT /note="XPG N-terminal"
FT /evidence="ECO:0000259|SMART:SM00485"
FT DOMAIN 132..202
FT /note="XPG-I"
FT /evidence="ECO:0000259|SMART:SM00484"
FT REGION 428..448
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 606 AA; 66855 MW; 385C1A4028C86418 CRC64;
MGVKNLWDIL ESCKKKLPLH HLQNKKVCVD LSCWLVQMYS ANRSPAFAKD KVYLKNLFHR
IRALLALNCT LLFVTDGAIP SLKLATYRRR LGSISHAAKE SDQPNSHPSI SLRRNKGSEF
SCMIKEAKRL GMALGIPCLD GLEEAEAQCA SLDLESLCDG CFTSDSDAFL FGARTVYRDV
FIGEGGYVIC YEMEDIEKTL GFGRNSLISL AVLLGSDYSN GVNGFGPETA CRLVKSVGDN
LILDQILSNG VKATRKCKGK NSGNKVDDMC PKASSCEVGM TQDSDGQFRD VINAYLEPKC
HSPDSEAVQR VCGQHPFLRP QLQKICEEYF DWSPEKTDQY ILPKIAEREL RRFSDLRSAS
SALGIKPLLS EIPVPCPVLA IVKQRKVHGN ECYEVSWRNI EGLQVSVVPG DLVKSACPEK
ITEFLEKKGE EKKQKRRARP KKSGQAAVKD VDEQLQELLL GIEADSGGIL GATASVCQTL
TAAYTVAVED VVDLSSPSPP LRKLSKSQKK MMAEDVNVAG MNMNKMESES SFSTQSSTSD
VDNQLIDLSS PLAGGDNGMK GGRRALADIS NVGDRSRVHH DDDDVIHERK ARDLRMFLDS
IRNELY
//
