ID A0A0F3IEV9_9GAMM Unreviewed; 686 AA.
AC A0A0F3IEV9;
DT 24-JUN-2015, integrated into UniProtKB/TrEMBL.
DT 24-JUN-2015, sequence version 1.
DT 27-MAR-2024, entry version 29.
DE RecName: Full=PAS domain S-box protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=VZ94_18770 {ECO:0000313|EMBL:KJV05355.1};
OS Methylocucumis oryzae.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Methylococcales;
OC Methylococcaceae; Methylocucumis.
OX NCBI_TaxID=1632867 {ECO:0000313|EMBL:KJV05355.1, ECO:0000313|Proteomes:UP000033684};
RN [1] {ECO:0000313|Proteomes:UP000033684}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Sn10-6 {ECO:0000313|Proteomes:UP000033684};
RA Pandit P.S., Pore S.D., Arora P., Kapse N.G., Dhakephalkar P.K.,
RA Rahalkar M.C.;
RT "Draft genome sequence of a novel methanotroph (Sn10-6) isolated from
RT flooded ricefield rhizosphere in India.";
RL Submitted (MAR-2015) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:KJV05355.1, ECO:0000313|Proteomes:UP000033684}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Sn10-6 {ECO:0000313|EMBL:KJV05355.1,
RC ECO:0000313|Proteomes:UP000033684};
RX PubMed=26547566; DOI=10.1007/s00248-015-0699-z;
RA Rahalkar M.C., Pandit P.S., Dhakephalkar P.K., Pore S., Arora P., Kapse N.;
RT "Genome Characteristics of a Novel Type I Methanotroph (Sn10-6) Isolated
RT from a Flooded Indian Rice Field.";
RL Microb. Ecol. 71:519-523(2016).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KJV05355.1}.
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DR EMBL; LAJX01000242; KJV05355.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0F3IEV9; -.
DR Proteomes; UP000033684; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR CDD; cd00130; PAS; 4.
DR Gene3D; 3.30.450.20; PAS domain; 4.
DR InterPro; IPR029095; NarX-like_N.
DR InterPro; IPR001610; PAC.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR000700; PAS-assoc_C.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013656; PAS_4.
DR InterPro; IPR013655; PAS_fold_3.
DR NCBIfam; TIGR00229; sensory_box; 4.
DR PANTHER; PTHR44757:SF11; DIGUANYLATE CYCLASE DGCE-RELATED; 1.
DR PANTHER; PTHR44757; DIGUANYLATE CYCLASE DGCP; 1.
DR Pfam; PF08447; PAS_3; 1.
DR Pfam; PF08448; PAS_4; 1.
DR Pfam; PF13426; PAS_9; 2.
DR Pfam; PF13675; PilJ; 1.
DR SMART; SM00086; PAC; 4.
DR SMART; SM00091; PAS; 4.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 4.
DR PROSITE; PS50113; PAC; 2.
DR PROSITE; PS50112; PAS; 2.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Membrane {ECO:0000256|ARBA:ARBA00023136};
KW Reference proteome {ECO:0000313|Proteomes:UP000033684};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989}.
FT DOMAIN 185..239
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 308..349
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 379..429
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 504..555
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT COILED 539..566
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 686 AA; 78869 MW; 13AD9E69381FA09E CRC64;
MFIGILLANY LVTEQYTHIY RHDAQLINLA GRQRMLVSRI AFLSTQTDEQ SNAELVESIK
TLRAEFTELM SSQEDLAHDV SIHYLYLSGN NPIAPRINQF LDAIAQKDTQ QISVLYRKLL
PDINNAVNVF SQQANHHADI LHKIGLVIET FAVIFVMTGI HRRLLRRVHQ AIAEQSLATV
QLEQQKSQIR AIFDASSVPK ALHSRGRILY INPAFTRRFG YTLADIQSLN DWWSLAYPDP
SYRDWVREEW TKRLTRNQLG APFEALEARI TCKNGTICIV QIEAVSLQND YQHVDWVTFF
DITALHDATD RLQTLLETAS DGIHVLDTKG NVIEFSHAFA RMLGYSLEET ACLNVSDWDA
MIPKNLQLST IAEILTNPTT FETKHRRKDG SVFDAEINAK AIELGGKTYL YASSRNITER
KNMEAELHRR EQYQRVLLDN FPFFVWLKDT DSRLLTANLH YARVAKVNST KDLEGKTDFD
FFPHDLAEKY VADDRTVIET QQSKHVQEEF VTETGERYWI ETWKAPLIID GEIAGTVGYS
KDITEQRRAE NEINRLKEQY EVLFTDSPDA YLVVAFEDGC ILDCNRALET MMRGTRKDII
GKSVINISPP NQPDGSRSDV AGFEHIMRAY NQGYTCFEWV HRRLDNSDFW VEVTVSRTPF
HGQDALLGAW RDITERKAME KTVSRK
//
