ID A0A0F3IMB4_9GAMM Unreviewed; 193 AA.
AC A0A0F3IMB4;
DT 24-JUN-2015, integrated into UniProtKB/TrEMBL.
DT 24-JUN-2015, sequence version 1.
DT 03-MAY-2023, entry version 31.
DE RecName: Full=HTH marR-type domain-containing protein {ECO:0000259|SMART:SM00347};
GN ORFNames=VZ94_09760 {ECO:0000313|EMBL:KJV06679.1};
OS Methylocucumis oryzae.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Methylococcales;
OC Methylococcaceae; Methylocucumis.
OX NCBI_TaxID=1632867 {ECO:0000313|EMBL:KJV06679.1, ECO:0000313|Proteomes:UP000033684};
RN [1] {ECO:0000313|Proteomes:UP000033684}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Sn10-6 {ECO:0000313|Proteomes:UP000033684};
RA Pandit P.S., Pore S.D., Arora P., Kapse N.G., Dhakephalkar P.K.,
RA Rahalkar M.C.;
RT "Draft genome sequence of a novel methanotroph (Sn10-6) isolated from
RT flooded ricefield rhizosphere in India.";
RL Submitted (MAR-2015) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:KJV06679.1, ECO:0000313|Proteomes:UP000033684}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Sn10-6 {ECO:0000313|EMBL:KJV06679.1,
RC ECO:0000313|Proteomes:UP000033684};
RX PubMed=26547566; DOI=10.1007/s00248-015-0699-z;
RA Rahalkar M.C., Pandit P.S., Dhakephalkar P.K., Pore S., Arora P., Kapse N.;
RT "Genome Characteristics of a Novel Type I Methanotroph (Sn10-6) Isolated
RT from a Flooded Indian Rice Field.";
RL Microb. Ecol. 71:519-523(2016).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KJV06679.1}.
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DR EMBL; LAJX01000096; KJV06679.1; -; Genomic_DNA.
DR RefSeq; WP_045779085.1; NZ_LAJX01000096.1.
DR AlphaFoldDB; A0A0F3IMB4; -.
DR OrthoDB; 8911933at2; -.
DR Proteomes; UP000033684; Unassembled WGS sequence.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR000835; HTH_MarR-typ.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR Pfam; PF01047; MarR; 1.
DR SMART; SM00347; HTH_MARR; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000033684}.
FT DOMAIN 94..190
FT /note="HTH marR-type"
FT /evidence="ECO:0000259|SMART:SM00347"
SQ SEQUENCE 193 AA; 21709 MW; 2787DACDF09BD10E CRC64;
MDALNEHRDA YRNALKDQNT PQVYAEKAWL TAFAAQALLN QDNAEMRAML ASYADLAGLA
DHFDTTGKPG DRWRTINELL TLALESGKPL QQLRLVMPST VSGSIMSHID NTPGITPSEI
ARRCSKEKSH IANELKKLEQ NGLCYRLKQG RKHQLFLSKL GKDTLDSIKP VKLITTTPKR
EFEHANPERS EKI
//
