ID A0A0J0UT93_9ACTN Unreviewed; 388 AA.
AC A0A0J0UT93;
DT 14-OCT-2015, integrated into UniProtKB/TrEMBL.
DT 14-OCT-2015, sequence version 1.
DT 08-NOV-2023, entry version 22.
DE SubName: Full=Ribonuclease D {ECO:0000313|EMBL:KLR60087.1};
DE EC=3.1.13.5 {ECO:0000313|EMBL:KLR60087.1};
GN ORFNames=IMCC26207_110333 {ECO:0000313|EMBL:KLR60087.1};
OS Actinobacteria bacterium IMCC26207.
OC Bacteria; Actinomycetota; Actinomycetes.
OX NCBI_TaxID=1641811 {ECO:0000313|EMBL:KLR60087.1, ECO:0000313|Proteomes:UP000036180};
RN [1] {ECO:0000313|EMBL:KLR60087.1, ECO:0000313|Proteomes:UP000036180}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IMCC26207 {ECO:0000313|EMBL:KLR60087.1,
RC ECO:0000313|Proteomes:UP000036180};
RA Kim S., Cho J.-C.;
RT "Genome sequence of freshwater Actinobacteria.";
RL Submitted (MAY-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KLR60087.1}.
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DR EMBL; LCZK01000010; KLR60087.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0J0UT93; -.
DR STRING; 1641811.IMCC26207_110333; -.
DR PATRIC; fig|1641811.3.peg.2646; -.
DR Proteomes; UP000036180; Unassembled WGS sequence.
DR GO; GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0000166; F:nucleotide binding; IEA:InterPro.
DR GO; GO:0033890; F:ribonuclease D activity; IEA:UniProtKB-EC.
DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR CDD; cd06142; RNaseD_exo; 1.
DR Gene3D; 1.10.150.80; HRDC domain; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR002562; 3'-5'_exonuclease_dom.
DR InterPro; IPR010997; HRDC-like_sf.
DR InterPro; IPR002121; HRDC_dom.
DR InterPro; IPR044876; HRDC_dom_sf.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR PANTHER; PTHR47649; RIBONUCLEASE D; 1.
DR PANTHER; PTHR47649:SF1; RIBONUCLEASE D; 1.
DR Pfam; PF01612; DNA_pol_A_exo1; 1.
DR Pfam; PF00570; HRDC; 1.
DR SMART; SM00474; 35EXOc; 1.
DR SMART; SM00341; HRDC; 1.
DR SUPFAM; SSF47819; HRDC-like; 2.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50967; HRDC; 1.
PE 4: Predicted;
KW Hydrolase {ECO:0000313|EMBL:KLR60087.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000036180}.
FT DOMAIN 213..294
FT /note="HRDC"
FT /evidence="ECO:0000259|PROSITE:PS50967"
SQ SEQUENCE 388 AA; 42851 MW; 482AAB8374BC2D5C CRC64;
MVESAGREFE LIQDDAAFAE LVKRVESEPV YAIDTEFHRE RTYFPQVALV QIADSHGIAL
VDSLKVDLHP FAAVLEGDGL AVMHAARQDL EVMERSCGTI PLRLLDTQIA AGFLGYTSPS
LSTLLERELD VIAPKADRLT DWLRRPLGEA QLIYAASDVA HLLELSAQLM GRIEERGRTA
WVEAACEELR TEDRGPRNPE EAWRRIKEVR HLRGASLAIA QAVAAWRETK AVETDQTPRF
VLSDLGVVGV AAAVPATVEE IRSLRGVEGR NLRSGMAEEL LVVVQESRSN TPTRAPVSHS
PELPSELKPA LPLVSAWVSQ RARELELETS LLATRSDLED LLRGVPDARL TLGWRAELVG
EPIRRLVSGE ATLAFDRKVG LLLEPRIP
//
