ID A0A0J6Y631_COCIT Unreviewed; 829 AA.
AC A0A0J6Y631;
DT 14-OCT-2015, integrated into UniProtKB/TrEMBL.
DT 14-OCT-2015, sequence version 1.
DT 13-SEP-2023, entry version 22.
DE RecName: Full=Cap binding protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=CIRG_09956 {ECO:0000313|EMBL:KMP02133.1};
OS Coccidioides immitis RMSCC 2394.
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes;
OC Eurotiomycetidae; Onygenales; Onygenaceae; Coccidioides.
OX NCBI_TaxID=404692 {ECO:0000313|EMBL:KMP02133.1, ECO:0000313|Proteomes:UP000054565};
RN [1] {ECO:0000313|Proteomes:UP000054565}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=RMSCC 2394 {ECO:0000313|Proteomes:UP000054565};
RX PubMed=20516208; DOI=10.1101/gr.103911.109;
RA Neafsey D.E., Barker B.M., Sharpton T.J., Stajich J.E., Park D.J.,
RA Whiston E., Hung C.-Y., McMahan C., White J., Sykes S., Heiman D.,
RA Young S., Zeng Q., Abouelleil A., Aftuck L., Bessette D., Brown A.,
RA FitzGerald M., Lui A., Macdonald J.P., Priest M., Orbach M.J.,
RA Galgiani J.N., Kirkland T.N., Cole G.T., Birren B.W., Henn M.R.,
RA Taylor J.W., Rounsley S.D.;
RT "Population genomic sequencing of Coccidioides fungi reveals recent
RT hybridization and transposon control.";
RL Genome Res. 20:938-946(2010).
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DR EMBL; DS028102; KMP02133.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0J6Y631; -.
DR STRING; 404692.A0A0J6Y631; -.
DR Proteomes; UP000054565; Unassembled WGS sequence.
DR GO; GO:0005846; C:nuclear cap binding complex; IEA:InterPro.
DR GO; GO:0000339; F:RNA cap binding; IEA:InterPro.
DR GO; GO:0006406; P:mRNA export from nucleus; IEA:InterPro.
DR GO; GO:0016070; P:RNA metabolic process; IEA:InterPro.
DR Gene3D; 1.25.40.180; -; 3.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR027159; CBP80.
DR InterPro; IPR015172; MIF4G-like_typ-1.
DR InterPro; IPR015174; MIF4G-like_typ-2.
DR PANTHER; PTHR12412; CAP BINDING PROTEIN; 1.
DR PANTHER; PTHR12412:SF2; NUCLEAR CAP-BINDING PROTEIN SUBUNIT 1; 1.
DR Pfam; PF09088; MIF4G_like; 1.
DR Pfam; PF09090; MIF4G_like_2; 1.
DR SUPFAM; SSF48371; ARM repeat; 3.
PE 4: Predicted;
FT DOMAIN 325..515
FT /note="MIF4G-like type 1"
FT /evidence="ECO:0000259|Pfam:PF09088"
FT DOMAIN 532..783
FT /note="MIF4G-like type 2"
FT /evidence="ECO:0000259|Pfam:PF09090"
FT REGION 1..36
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 269..295
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 798..829
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 269..286
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 810..829
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 829 AA; 92798 MW; 4A4D35BE528DA11C CRC64;
MVDHEARRPA GGFNRKRRYR EDEGGERHRP RRRYEEPLSA SVRRQLLTIA ESAVRRVEDD
VAKIANTICE HSEDEEVQND FQDLVLQLVI EQPFKIPFVA AVVLLINAQK SEIASRAFTK
AGEMAQSYIA AGEWREVKLV LRFLGCLQGA FEGDGIFPIL EELFSRAVDL QTASSDDSLG
LELVKIILYT ISYVMGSSAS GFESHASALL EKTDIIASTP HTLEALVDPF PSEEKTEEER
LSALGLLQKQ LQNEAKNSWE LACLPRPWKM PPKEEDNSDR DPLKNATKHP FPSISIPDPV
KNGPRAIFPE IFLSVYADQN IETVPPTTDI ASSLIRDVLV DTINILDYNR IAAAKFLIDV
DCYFAPTTFI KRATPFDKLR DVAPDTPTWK PEDVALDAVF SQLLQLPSPE HKQVYYHSVL
TEACKIAPAA IAPSLGRAIR FLYRNVDKLD LAPTYRFLDW FSHHLSNFGF TWKWTEWVDD
VELPAVHPKK AFIIGALDKE IRLSFAQRIK GTIPEPYQAL ISENKEKDTP DFKYAQETTP
YSKEGQEILQ LIRKKASDEE IAPVIASIEE QAKAHGIADP SIPSTDAFVT SICCVGSKSL
SHLLSSIERC KERLLAIGPR SAAARRQIIT SVMEYWVDQP GNAVNIVDKL LNYTILTPLS
VIEWALVDNL AAGSILAKPH IFEMISATMG KVTNRIRQIV AARTQPTLVE PQLSVIQDAL
TRESADMRAM FRLIDDSIVP VASGTNDVMM ERDDDSALAP ENELIREWGK RWLRVFRRKA
AVEDAFITEA MVNAVPVGTM PPPQPQPQPV QTAMETHGAD GQNEMTDIQ
//
