ID A0A0J7KAB8_LASNI Unreviewed; 842 AA.
AC A0A0J7KAB8;
DT 14-OCT-2015, integrated into UniProtKB/TrEMBL.
DT 14-OCT-2015, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE RecName: Full=RNA-directed DNA polymerase {ECO:0000256|ARBA:ARBA00012493};
DE EC=2.7.7.49 {ECO:0000256|ARBA:ARBA00012493};
GN ORFNames=RF55_13355 {ECO:0000313|EMBL:KMQ87373.1};
OS Lasius niger (Black garden ant).
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota;
OC Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea;
OC Formicidae; Formicinae; Lasius; Lasius.
OX NCBI_TaxID=67767 {ECO:0000313|EMBL:KMQ87373.1, ECO:0000313|Proteomes:UP000036403};
RN [1] {ECO:0000313|EMBL:KMQ87373.1, ECO:0000313|Proteomes:UP000036403}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC TISSUE=Whole {ECO:0000313|EMBL:KMQ87373.1};
RA Konorov E.A., Nikitin M.A., Kirill M.V., Chang P.;
RT "Lasius niger genome sequencing.";
RL Submitted (APR-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KMQ87373.1}.
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DR EMBL; LBMM01010585; KMQ87373.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0J7KAB8; -.
DR STRING; 67767.A0A0J7KAB8; -.
DR PaxDb; 67767-A0A0J7KAB8; -.
DR OrthoDB; 3307438at2759; -.
DR Proteomes; UP000036403; Unassembled WGS sequence.
DR GO; GO:0042575; C:DNA polymerase complex; IEA:UniProt.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0071897; P:DNA biosynthetic process; IEA:UniProt.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR CDD; cd09274; RNase_HI_RT_Ty3; 1.
DR CDD; cd01647; RT_LTR; 1.
DR Gene3D; 1.10.340.70; -; 1.
DR Gene3D; 3.10.20.370; -; 1.
DR Gene3D; 3.30.70.270; -; 3.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR041588; Integrase_H2C2.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR000477; RT_dom.
DR InterPro; IPR041373; RT_RNaseH.
DR PANTHER; PTHR37984:SF7; INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR37984; PROTEIN CBG26694; 1.
DR Pfam; PF17921; Integrase_H2C2; 1.
DR Pfam; PF17917; RT_RNaseH; 1.
DR Pfam; PF00665; rve; 1.
DR Pfam; PF00078; RVT_1; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50994; INTEGRASE; 1.
DR PROSITE; PS50878; RT_POL; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000036403};
KW Transposable element {ECO:0000256|ARBA:ARBA00022464}.
FT DOMAIN 1..168
FT /note="Reverse transcriptase"
FT /evidence="ECO:0000259|PROSITE:PS50878"
FT DOMAIN 553..712
FT /note="Integrase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50994"
SQ SEQUENCE 842 AA; 98317 MW; E3A7CBDAE092275E CRC64;
MGFPCCHGKK KDGSLRFCVD YRKLNSVTVK DSYPLPRIED ILDQLSGNSW FSTLDLKSGY
WQVKLDSKDK EKTAFSIGNG LWQFNVMPFG LCNAPATFER LMEKVLQDIL SKICLVYLDD
VIVFSKTFEE MMENLREVFL RLRSANLKLN PKKCSLFGRE VKYLGHVVSE QGITTDPEKI
SAVKNWPVPQ NRKQLRSFLG FCSYYRKFIK DFSMIAKPLF TLTEHQVKFE WNSSCEEAFE
GLKKRLVSSP ILSFPKEQGQ FILDTDASNH GIGAVLSQVQ NGSEKVIAYF SRVLSKAERN
YCITRRELLA IVASLKSFHH YLYGRRFQIR TDHISLRWLL SFKDLEGQLA RWLERLQQYE
FEIIHRKGRL HQNADGLSRR PCSKLGCTYC TKVELKENSV ARIILGENSL QEWRNRQMGD
PIVSIFLQGK EINERPNLQE VNRDVSAKIY WCYWDALILK DGVLYKRWES PNLKSKIFQI
IVPRNFINQV MEEAHDSASG GHFGVNKTLE KIRKRFYWAT CKNDVEDWCR SCKTCVARRG
PSEKGKSPLQ IFDAGFPFER VQMDILGPLP TTAARNRYLL VIIDCFTKWV EAFPLKNFKA
RTVADIFVKQ FVSRHGVPLE VHTDQGKCFE SKIFQEMTRL LGIRKTRTTA LHPQSDGQVE
RHHQTILNYL AKFVSDDQKD WDNWIHMYLL AYRSSKHEAT GASPAELYFA RDLRLPLDLL
RGSPPVDEED NSSEGYMQKL RKKLDNIHKS ARQRMNLQSL RSKIRYDRRV RKINFNIDQK
VWLYNPRRVR GKSPKLQSNW EGPYKIIKRL SDVVFGIRKS NRHKCKIVHS DRLAPFYNRR
LD
//
