ID A0A0L0DJY8_THETB Unreviewed; 905 AA.
AC A0A0L0DJY8;
DT 11-NOV-2015, integrated into UniProtKB/TrEMBL.
DT 11-NOV-2015, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE SubName: Full=COP-II coat subunit {ECO:0000313|EMBL:KNC52540.1};
GN ORFNames=AMSG_08107 {ECO:0000313|EMBL:KNC52540.1};
OS Thecamonas trahens ATCC 50062.
OC Eukaryota; Apusozoa; Apusomonadida; Apusomonadidae; Thecamonas.
OX NCBI_TaxID=461836 {ECO:0000313|EMBL:KNC52540.1, ECO:0000313|Proteomes:UP000054408};
RN [1] {ECO:0000313|EMBL:KNC52540.1, ECO:0000313|Proteomes:UP000054408}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 50062 {ECO:0000313|EMBL:KNC52540.1,
RC ECO:0000313|Proteomes:UP000054408};
RG The Broad Institute Genome Sequencing Platform;
RA Russ C., Cuomo C., Shea T., Young S.K., Zeng Q., Koehrsen M., Haas B.,
RA Borodovsky M., Guigo R., Alvarado L., Berlin A., Bochicchio J.,
RA Borenstein D., Chapman S., Chen Z., Freedman E., Gellesch M., Goldberg J.,
RA Griggs A., Gujja S., Heilman E., Heiman D., Hepburn T., Howarth C., Jen D.,
RA Larson L., Mehta T., Park D., Pearson M., Roberts A., Saif S., Shenoy N.,
RA Sisk P., Stolte C., Sykes S., Thomson T., Walk T., White J., Yandava C.,
RA Burger G., Gray M.W., Holland P.W.H., King N., Lang F.B.F., Roger A.J.,
RA Ruiz-Trillo I., Lander E., Nusbaum C.;
RT "The Genome Sequence of Thecamonas trahens ATCC 50062.";
RL Submitted (MAY-2010) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the SEC23/SEC24 family. SEC24 subfamily.
CC {ECO:0000256|ARBA:ARBA00008334}.
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DR EMBL; GL349473; KNC52540.1; -; Genomic_DNA.
DR RefSeq; XP_013755331.1; XM_013899877.1.
DR AlphaFoldDB; A0A0L0DJY8; -.
DR STRING; 461836.A0A0L0DJY8; -.
DR EnsemblProtists; KNC52540; KNC52540; AMSG_08107.
DR GeneID; 25566871; -.
DR eggNOG; KOG1985; Eukaryota.
DR OMA; AVECSKQ; -.
DR OrthoDB; 977017at2759; -.
DR Proteomes; UP000054408; Unassembled WGS sequence.
DR GO; GO:0030127; C:COPII vesicle coat; IEA:InterPro.
DR GO; GO:0005794; C:Golgi apparatus; IEA:UniProtKB-KW.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0006888; P:endoplasmic reticulum to Golgi vesicle-mediated transport; IEA:InterPro.
DR GO; GO:0006886; P:intracellular protein transport; IEA:InterPro.
DR Gene3D; 2.60.40.1670; beta-sandwich domain of Sec23/24; 1.
DR Gene3D; 1.20.120.730; Sec23/Sec24 helical domain; 1.
DR Gene3D; 3.40.20.10; Severin; 1.
DR Gene3D; 3.40.50.410; von Willebrand factor, type A domain; 1.
DR Gene3D; 2.30.30.380; Zn-finger domain of Sec23/24; 1.
DR InterPro; IPR029006; ADF-H/Gelsolin-like_dom_sf.
DR InterPro; IPR007123; Gelsolin-like_dom.
DR InterPro; IPR036180; Gelsolin-like_dom_sf.
DR InterPro; IPR006900; Sec23/24_helical_dom.
DR InterPro; IPR036175; Sec23/24_helical_dom_sf.
DR InterPro; IPR006896; Sec23/24_trunk_dom.
DR InterPro; IPR012990; Sec23_24_beta_S.
DR InterPro; IPR036465; vWFA_dom_sf.
DR InterPro; IPR006895; Znf_Sec23_Sec24.
DR InterPro; IPR036174; Znf_Sec23_Sec24_sf.
DR PANTHER; PTHR13803; SEC24-RELATED PROTEIN; 1.
DR PANTHER; PTHR13803:SF39; SECRETORY 24AB, ISOFORM A; 1.
DR Pfam; PF00626; Gelsolin; 1.
DR Pfam; PF08033; Sec23_BS; 1.
DR Pfam; PF04815; Sec23_helical; 1.
DR Pfam; PF04811; Sec23_trunk; 1.
DR Pfam; PF04810; zf-Sec23_Sec24; 1.
DR SUPFAM; SSF81995; beta-sandwich domain of Sec23/24; 1.
DR SUPFAM; SSF82754; C-terminal, gelsolin-like domain of Sec23/24; 1.
DR SUPFAM; SSF81811; Helical domain of Sec23/24; 1.
DR SUPFAM; SSF53300; vWA-like; 1.
DR SUPFAM; SSF82919; Zn-finger domain of Sec23/24; 1.
PE 3: Inferred from homology;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW Golgi apparatus {ECO:0000256|ARBA:ARBA00023034};
KW Protein transport {ECO:0000256|ARBA:ARBA00022927};
KW Reference proteome {ECO:0000313|Proteomes:UP000054408};
KW Transport {ECO:0000256|ARBA:ARBA00022448}.
FT DOMAIN 240..277
FT /note="Zinc finger Sec23/Sec24-type"
FT /evidence="ECO:0000259|Pfam:PF04810"
FT DOMAIN 315..551
FT /note="Sec23/Sec24 trunk"
FT /evidence="ECO:0000259|Pfam:PF04811"
FT DOMAIN 558..646
FT /note="Sec23/Sec24 beta-sandwich"
FT /evidence="ECO:0000259|Pfam:PF08033"
FT DOMAIN 658..759
FT /note="Sec23/Sec24 helical"
FT /evidence="ECO:0000259|Pfam:PF04815"
FT DOMAIN 780..843
FT /note="Gelsolin-like"
FT /evidence="ECO:0000259|Pfam:PF00626"
FT REGION 100..171
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 127..153
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 905 AA; 97358 MW; D3DA1929BCBC75B9 CRC64;
MENSESIVGG GVPLSVETAA DPSRVRMGPP PTSAGRRLAV HPAPAARLLP VARLLLVARL
LPVARLLPVA RRALVVRPAP VVRPALVARP ALVARLPPVA RPGLQAPPGR ATLRCGVGPG
SSAAPQPPHA ASASNGRASS STGPPTGSAN FRFGSEQHGG DGVPRPVNDE FILPPDDVAQ
HPSLGPMSSD PFHFRPTIHA VPATEALLNS TGLTFGAVLS PFAEKPDEEV PTVQQTRAGI
VRCRRCRSYV HPFVQWLDHG RKWRCSVCHL VNDCPEAFRG RVDERGRRVD AAERTELSCG
SVEYVAPKEY MMRAPQPPTY VFVIDVSATS AASSIPEVVA STLSNSLEDI YEDERALVAF
ITYDSKLHFY GLDSAFMQPR MMVVSEFADG VELPAPTPRM LVRASEAREN IEHLLEGFPT
MFEDNQDSGA ALGPALQAAF SMVGHVGGKV LVVAAGRPSV GAGAVKARDE RKAIGTAKES
ALLTPADNFY KLLAVDAAPL HVSFDLFMLA QRPSELSTVS SLSRHTGGKV FFYPNFSLSK
DGQRVSADLS AMITRPTGWE AVMRIRCSRG LKITGFHGHY FARSSDLLAL PNVDAASTFG
VTIAIEDSAL EGARSKFSYA TMQAALLYTA SNGERRIRVH TLALPIVAEL PAVYQAADAP
CMAALLLKMA TLKAESSTIE DARSAMLNKM DDIVKSFKSL SKSAGGSGQL VLPASLRLLP
YYTLAGLKNR ALRVEGAGSV DGRSFALTRA RTLPVHYLLH TIAPRLFRVQ PGPVNPQLSK
LPLTLSLTAA SLGSDHVMLL DTMSALWLWV GRDTPGPVIR AVFGMDSLAS VESTQLRLQP
LDNDLSAHVF AMISLIRSQR DEYMPVYIVK QDGRYHASFC SFLVEDRSSS VMAYPEYLQA
LAKKK
//
