ID A0A0L9TK99_PHAAN Unreviewed; 427 AA.
AC A0A0L9TK99;
DT 11-NOV-2015, integrated into UniProtKB/TrEMBL.
DT 11-NOV-2015, sequence version 1.
DT 27-MAR-2024, entry version 35.
DE RecName: Full=Histone deacetylase domain-containing protein {ECO:0000259|Pfam:PF00850};
GN ORFNames=LR48_Vigan01g012800 {ECO:0000313|EMBL:KOM30574.1};
OS Phaseolus angularis (Azuki bean) (Vigna angularis).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Vigna.
OX NCBI_TaxID=3914 {ECO:0000313|EMBL:KOM30574.1, ECO:0000313|Proteomes:UP000053144};
RN [1] {ECO:0000313|Proteomes:UP000053144}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. Jingnong 6 {ECO:0000313|Proteomes:UP000053144};
RX PubMed=26460024; DOI=10.1073/pnas.1420949112;
RA Yang K., Tian Z., Chen C., Luo L., Zhao B., Wang Z., Yu L., Li Y., Sun Y.,
RA Li W., Chen Y., Li Y., Zhang Y., Ai D., Zhao J., Shang C., Ma Y., Wu B.,
RA Wang M., Gao L., Sun D., Zhang P., Guo F., Wang W., Li Y., Wang J.,
RA Varshney R.K., Wang J., Ling H.Q., Wan P.;
RT "Genome sequencing of adzuki bean (Vigna angularis) provides insight into
RT high starch and low fat accumulation and domestication.";
RL Proc. Natl. Acad. Sci. U.S.A. 112:13213-13218(2015).
CC -!- COFACTOR:
CC Name=Zn(2+); Xref=ChEBI:CHEBI:29105;
CC Evidence={ECO:0000256|ARBA:ARBA00001947};
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DR EMBL; CM003371; KOM30574.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0L9TK99; -.
DR STRING; 3914.A0A0L9TK99; -.
DR EnsemblPlants; KOM30574; KOM30574; LR48_Vigan01g012800.
DR Gramene; KOM30574; KOM30574; LR48_Vigan01g012800.
DR OMA; CTSPAMG; -.
DR Proteomes; UP000053144; Chromosome 1.
DR GO; GO:0009507; C:chloroplast; IEA:EnsemblPlants.
DR GO; GO:0005739; C:mitochondrion; IEA:EnsemblPlants.
DR GO; GO:0004407; F:histone deacetylase activity; IEA:UniProtKB-EC.
DR GO; GO:0030186; P:melatonin metabolic process; IEA:EnsemblPlants.
DR CDD; cd09992; HDAC_classII; 1.
DR Gene3D; 3.40.800.20; Histone deacetylase domain; 1.
DR InterPro; IPR000286; His_deacetylse.
DR InterPro; IPR023801; His_deacetylse_dom.
DR InterPro; IPR037138; His_deacetylse_dom_sf.
DR InterPro; IPR023696; Ureohydrolase_dom_sf.
DR PANTHER; PTHR10625:SF4; HISTONE DEACETYLASE 6, ISOFORM G; 1.
DR PANTHER; PTHR10625; HISTONE DEACETYLASE HDAC1-RELATED; 1.
DR Pfam; PF00850; Hist_deacetyl; 1.
DR PRINTS; PR01270; HDASUPER.
DR SUPFAM; SSF52768; Arginase/deacetylase; 1.
PE 4: Predicted;
KW Chromatin regulator {ECO:0000256|ARBA:ARBA00022853};
KW Reference proteome {ECO:0000313|Proteomes:UP000053144};
KW Repressor {ECO:0000256|ARBA:ARBA00022491};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 81..389
FT /note="Histone deacetylase"
FT /evidence="ECO:0000259|Pfam:PF00850"
SQ SEQUENCE 427 AA; 46273 MW; 5FA25801AB1BEFB6 CRC64;
MHLHKLSSMP SSLGSAFFLV GHRVLDMRRS NGCLFRKNRR WVGASISCSG VRNDLPSIEQ
LSDARVIYSV AASMGHNQEA HPESHFRVPA IVNALEEMQL SSKFRGSELI ELQNFEPASV
DDIASVHARA YVSGLEKVMD QAVEKGLIFV EGSGPTYATA TTFQESIIAA GAGLALVDSV
VISQPGSKIK SDAPTGFALI RPPGHHAVPQ GPMGFCIFSN VAIAARHAQR VHGLKRVFII
DFDVHHGNGT NDAFYNDPDV FFLSFHQDGS YPGTGKFNEV GSGDGEGTTL NLPLPGGSGD
TAVRTVFDEV IVPCAQRFKP DIILVSAGYD GHVLDPLANL QYTTGTYYML ASSIKQLARD
LCGGRCVFFL EGGYNLKSLS YSVADTFRAL LGDRSLASEF DDPNILYEEP STKVKQAIQR
IKHIHSL
//
