ID A0A0L9UGW0_PHAAN Unreviewed; 307 AA.
AC A0A0L9UGW0;
DT 11-NOV-2015, integrated into UniProtKB/TrEMBL.
DT 11-NOV-2015, sequence version 1.
DT 27-MAR-2024, entry version 27.
DE RecName: Full=Rhamnogalacturonan endolyase {ECO:0008006|Google:ProtNLM};
GN ORFNames=LR48_Vigan04g200500 {ECO:0000313|EMBL:KOM41807.1};
OS Phaseolus angularis (Azuki bean) (Vigna angularis).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Vigna.
OX NCBI_TaxID=3914 {ECO:0000313|EMBL:KOM41807.1, ECO:0000313|Proteomes:UP000053144};
RN [1] {ECO:0000313|Proteomes:UP000053144}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. Jingnong 6 {ECO:0000313|Proteomes:UP000053144};
RX PubMed=26460024; DOI=10.1073/pnas.1420949112;
RA Yang K., Tian Z., Chen C., Luo L., Zhao B., Wang Z., Yu L., Li Y., Sun Y.,
RA Li W., Chen Y., Li Y., Zhang Y., Ai D., Zhao J., Shang C., Ma Y., Wu B.,
RA Wang M., Gao L., Sun D., Zhang P., Guo F., Wang W., Li Y., Wang J.,
RA Varshney R.K., Wang J., Ling H.Q., Wan P.;
RT "Genome sequencing of adzuki bean (Vigna angularis) provides insight into
RT high starch and low fat accumulation and domestication.";
RL Proc. Natl. Acad. Sci. U.S.A. 112:13213-13218(2015).
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DR EMBL; CM003374; KOM41807.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0L9UGW0; -.
DR STRING; 3914.A0A0L9UGW0; -.
DR EnsemblPlants; KOM41807; KOM41807; LR48_Vigan04g200500.
DR Gramene; KOM41807; KOM41807; LR48_Vigan04g200500.
DR OMA; RERCIND; -.
DR Proteomes; UP000053144; Chromosome 4.
DR GO; GO:0030246; F:carbohydrate binding; IEA:InterPro.
DR GO; GO:0071555; P:cell wall organization; IEA:UniProtKB-KW.
DR CDD; cd10316; RGL4_M; 1.
DR Gene3D; 2.60.40.1120; Carboxypeptidase-like, regulatory domain; 1.
DR Gene3D; 2.60.120.260; Galactose-binding domain-like; 1.
DR InterPro; IPR013784; Carb-bd-like_fold.
DR InterPro; IPR008979; Galactose-bd-like_sf.
DR InterPro; IPR029413; RG-lyase_II.
DR InterPro; IPR029411; RG-lyase_III.
DR PANTHER; PTHR32018:SF1; RHAMNOGALACTURONAN ENDOLYASE; 1.
DR PANTHER; PTHR32018; RHAMNOGALACTURONATE LYASE FAMILY PROTEIN; 1.
DR Pfam; PF14683; CBM-like; 1.
DR Pfam; PF14686; fn3_3; 1.
DR SUPFAM; SSF49785; Galactose-binding domain-like; 1.
DR SUPFAM; SSF49452; Starch-binding domain-like; 1.
PE 4: Predicted;
KW Cell wall biogenesis/degradation {ECO:0000256|ARBA:ARBA00023316};
KW Reference proteome {ECO:0000313|Proteomes:UP000053144}.
FT DOMAIN 97..170
FT /note="Rhamnogalacturonan lyase"
FT /evidence="ECO:0000259|Pfam:PF14686"
FT DOMAIN 184..301
FT /note="Rhamnogalacturonan lyase"
FT /evidence="ECO:0000259|Pfam:PF14683"
SQ SEQUENCE 307 AA; 35341 MW; 4109D2075A862351 CRC64;
MFLSAHYSGE DLVPKFNAGE AWKKVFGPVF IYLNSSYDGG DPLKLWDEAK QQMLVEVQSW
PYSFPESEDF AKWDERGNVS GRLLVRERCI NDDYISAKGA YVGLAPPGDV GSWQRECKNY
QFWAKADDDG YFSITNVRAG DYNVYAWVPG FIGDYKYDVA MTITEGCEID LGELVYEPPR
DGPTLWEIGI PDRTAAEFYV PDPNPKYVNK LFVNHPDKFR QYGLWERYAE LYPDKDLIYT
IGISDYTKDW FFAQVTRKKD DNTFQGTTWQ IKFQLDQVNK TSSYKLRVAL ASATLSELQV
NFLTSLV
//
