ID A0A0M0JKC2_9EUKA Unreviewed; 471 AA.
AC A0A0M0JKC2;
DT 11-NOV-2015, integrated into UniProtKB/TrEMBL.
DT 11-NOV-2015, sequence version 1.
DT 24-JAN-2024, entry version 20.
DE SubName: Full=ATP dependent DNA ligase {ECO:0000313|EMBL:KOO26708.1};
GN ORFNames=Ctob_008674 {ECO:0000313|EMBL:KOO26708.1};
OS Chrysochromulina tobinii.
OC Eukaryota; Haptista; Haptophyta; Prymnesiophyceae; Prymnesiales;
OC Chrysochromulinaceae; Chrysochromulina.
OX NCBI_TaxID=1460289 {ECO:0000313|EMBL:KOO26708.1, ECO:0000313|Proteomes:UP000037460};
RN [1] {ECO:0000313|Proteomes:UP000037460}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=CCMP291 {ECO:0000313|Proteomes:UP000037460};
RX PubMed=26397803; DOI=10.1371/journal.pgen.1005469;
RA Hovde B.T., Deodato C.R., Hunsperger H.M., Ryken S.A., Yost W., Jha R.K.,
RA Patterson J., Monnat R.J. Jr., Barlow S.B., Starkenburg S.R.,
RA Cattolico R.A.;
RT "Genome Sequence and Transcriptome Analyses of Chrysochromulina tobin:
RT Metabolic Tools for Enhanced Algal Fitness in the Prominent Order
RT Prymnesiales (Haptophyceae).";
RL PLoS Genet. 11:e1005469-e1005469(2015).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KOO26708.1}.
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DR EMBL; JWZX01002815; KOO26708.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0M0JKC2; -.
DR OrthoDB; 318623at2759; -.
DR Proteomes; UP000037460; Unassembled WGS sequence.
DR GO; GO:0016874; F:ligase activity; IEA:UniProtKB-KW.
DR Gene3D; 3.30.470.30; DNA ligase/mRNA capping enzyme; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR021122; RNA_ligase_dom_REL/Rnl2.
DR PANTHER; PTHR43883; SLR0207 PROTEIN; 1.
DR PANTHER; PTHR43883:SF2; TYR_PHOSPHATASE_2 DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF13671; AAA_33; 1.
DR Pfam; PF09414; RNA_ligase; 1.
DR SUPFAM; SSF56091; DNA ligase/mRNA capping enzyme, catalytic domain; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
PE 4: Predicted;
KW Ligase {ECO:0000313|EMBL:KOO26708.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000037460}.
FT DOMAIN 254..408
FT /note="RNA ligase"
FT /evidence="ECO:0000259|Pfam:PF09414"
FT REGION 1..23
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 448..471
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..19
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 471 AA; 50693 MW; A1D6F45EF9F54909 CRC64;
MTTTTTTAAD ETAATHTAPA TAPSRAPFAA HVATAATAAA ASHGVKRGGG GARRPSFVVL
VGLPGAGKST FARALSQGGE WEVISQDALG SKGAVESAVV NAIKAGKRVL VDRCNVRVAD
RKRILDIGMI EPSDAVAVHL TTAPEACVQR VAARTDHPTI PYGHGRSAVA SMAKALERPT
LAEGFAAVHT LDNDVQVRAL LRSWGGCEPE PVVPELAKFP RTHHVLNTGG SAVTRDDLVM
SGTDARRFHD GSVTVVAEEK VDGANLGFSL TKDYEVRCQN RAHFVTSASH AQWRSLDAWL
EEHSWALCQL LEPEVEVLFG EWCALQHSVP YSRLPGPFIA FDIYNKRTRT FASVAERNRR
LRGLGIPIVR QIARRRFHSA HELLALLDEH SAYGDGLVEG AYLRIDAPAD EGGTTNCVRG
KIVRPDFIQG CADGHWLSKE PIKNGIRPEQ WDEPAEEEEA VEDEAGTVIS L
//