ID A0A0M3DKQ1_9CLOT Unreviewed; 716 AA.
AC A0A0M3DKQ1;
DT 11-NOV-2015, integrated into UniProtKB/TrEMBL.
DT 11-NOV-2015, sequence version 1.
DT 24-JAN-2024, entry version 28.
DE RecName: Full=S1 motif domain-containing protein {ECO:0000259|PROSITE:PS50126};
GN ORFNames=VN21_05945 {ECO:0000313|EMBL:KKY01947.1};
OS Paraclostridium benzoelyticum.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae;
OC Paraclostridium.
OX NCBI_TaxID=1629550 {ECO:0000313|EMBL:KKY01947.1, ECO:0000313|Proteomes:UP000034407};
RN [1] {ECO:0000313|EMBL:KKY01947.1, ECO:0000313|Proteomes:UP000034407}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JC272 {ECO:0000313|EMBL:KKY01947.1,
RC ECO:0000313|Proteomes:UP000034407};
RA Jyothsna T., Sasikala C., Ramana C.;
RT "Microcin producing Clostridium sp. JC272T.";
RL Submitted (APR-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KKY01947.1}.
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DR EMBL; LBBT01000137; KKY01947.1; -; Genomic_DNA.
DR RefSeq; WP_046822474.1; NZ_LBBT01000137.1.
DR AlphaFoldDB; A0A0M3DKQ1; -.
DR PATRIC; fig|1629550.3.peg.640; -.
DR OrthoDB; 9804714at2; -.
DR Proteomes; UP000034407; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR CDD; cd05685; S1_Tex; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 1.10.10.650; RuvA domain 2-like; 1.
DR Gene3D; 1.10.3500.10; Tex N-terminal region-like; 1.
DR Gene3D; 1.10.150.310; Tex RuvX-like domain-like; 1.
DR Gene3D; 3.30.420.140; YqgF/RNase H-like domain; 1.
DR InterPro; IPR041692; HHH_9.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR010994; RuvA_2-like.
DR InterPro; IPR003029; S1_domain.
DR InterPro; IPR044146; S1_Tex.
DR InterPro; IPR023323; Tex-like_dom_sf.
DR InterPro; IPR023319; Tex-like_HTH_dom_sf.
DR InterPro; IPR018974; Tex-like_N.
DR InterPro; IPR032639; Tex_YqgF.
DR InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR PANTHER; PTHR10724:SF10; S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1; 1.
DR Pfam; PF12836; HHH_3; 1.
DR Pfam; PF17674; HHH_9; 1.
DR Pfam; PF00575; S1; 1.
DR Pfam; PF09371; Tex_N; 1.
DR Pfam; PF16921; Tex_YqgF; 1.
DR SMART; SM00316; S1; 1.
DR SMART; SM00732; YqgFc; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR SUPFAM; SSF47781; RuvA domain 2-like; 2.
DR SUPFAM; SSF158832; Tex N-terminal region-like; 1.
DR PROSITE; PS50126; S1; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000034407}.
FT DOMAIN 642..711
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
SQ SEQUENCE 716 AA; 80694 MW; 5739542CA13DB329 CRC64;
MDINKILKEE FNLRDSQVEN TIKLIDEGNT IPFIARYRKE MTGEMSDVIL RAFYDKLVYL
RNLQSRKDDV QRIIEEQGKL TDEILKNIKL AKTLQEVEDI YAPYKQKKRT RATIAKEKGL
ENLAIAILKD KVDLNLECKK YIDKEKEVNS EEDALKGAKD IIAELVSEDA KLRKYIRELA
LREGVISSKN SKDEKSVYDM YYEFSESVKT IAPHRVLALN RGEKEEYLKV KLEINNEKVI
NHIVDVYVNK NNQINKEEII SAIEDSYKRL IFPSIEREIR NHLTDLAHER AISVFGQNVK
SLLLQPPVKD KVVMGFDPAY RTGCKIAVVD KNGKLLDYTT VYPTKPQNDV DGAKKTLKGL
IEKYNIDIIS IGNGTASRES EQFVSEMIGE INSNVQYTIV SEAGASVYSA SELANEEHPD
INVSIRGAIS IARRLQDPLA ELVKIDPKSI GVGQYQHDLN KKRLEEVLSG VVEDAVNSVG
VDLNTASYSL LEHVAGISKT IAKNIIEYRE ENGDFTSRAQ IKKVKRLGPQ AFTQCAGFMR
IINSKNPLDN TGVHPESYDT CKSLLERLGY SLNDLKNRNV DEIDSKIADI GIHKLSEALE
VGIVTLKDII SEIKKPGRDP REEGIKPVLR TDVLKIEDIK EGMVLKGTVR NVVDFGAFVD
IGIKNDGLVH KSQMSNKFVK DPMTVVTVGD VIDVKVIGID LKTQKVSLTM KDIKEV
//
