ID A0A0M9VMR7_9BASI Unreviewed; 385 AA.
AC A0A0M9VMR7;
DT 09-DEC-2015, integrated into UniProtKB/TrEMBL.
DT 09-DEC-2015, sequence version 1.
DT 27-MAR-2024, entry version 29.
DE SubName: Full=Nonsense-mediated decay protein upf3 {ECO:0000313|EMBL:KOS12569.1};
GN ORFNames=Malapachy_2866 {ECO:0000313|EMBL:KOS12569.1};
OS Malassezia pachydermatis.
OC Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina;
OC Malasseziomycetes; Malasseziales; Malasseziaceae; Malassezia.
OX NCBI_TaxID=77020 {ECO:0000313|EMBL:KOS12569.1, ECO:0000313|Proteomes:UP000037751};
RN [1] {ECO:0000313|EMBL:KOS12569.1, ECO:0000313|Proteomes:UP000037751}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CBS 1879 {ECO:0000313|EMBL:KOS12569.1,
RC ECO:0000313|Proteomes:UP000037751};
RA Triana S., Ohm R., Gonzalez A., DeCock H., Restrepo S., Celis A.;
RT "Draft Genome Sequence of Malassezia furfur CBS1878 and Malassezia
RT pachydermatis CBS1879.";
RL Submitted (JUL-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the RENT3 family.
CC {ECO:0000256|ARBA:ARBA00005991}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KOS12569.1}.
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DR EMBL; LGAV01000011; KOS12569.1; -; Genomic_DNA.
DR RefSeq; XP_017990201.1; XM_018137352.1.
DR AlphaFoldDB; A0A0M9VMR7; -.
DR STRING; 77020.A0A0M9VMR7; -.
DR GeneID; 28729228; -.
DR VEuPathDB; FungiDB:Malapachy_2866; -.
DR OrthoDB; 77197at2759; -.
DR Proteomes; UP000037751; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:InterPro.
DR CDD; cd12455; RRM_like_Smg4_UPF3; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR039722; Upf3.
DR InterPro; IPR005120; UPF3_dom.
DR PANTHER; PTHR13112:SF0; FI21285P1; 1.
DR PANTHER; PTHR13112; UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEIN; 1.
DR Pfam; PF03467; Smg4_UPF3; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000037751}.
FT DOMAIN 19..196
FT /note="UPF3"
FT /evidence="ECO:0000259|Pfam:PF03467"
FT REGION 190..268
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 285..385
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 291..317
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 385 AA; 41758 MW; 9340CE961150185E CRC64;
MQPQRPGLLS GGRHRRRPRR KVVVRDLPPT LPAEVFWQSV SPWVQCTVTG ETALSRDRPI
QPAPGHAPTA LYAEYVPGKK RETAAETDVP SVAYIQFRDP AKELAFAKAF HGHVFRDSKG
VESTALVDYA LVSTLPTSRK PQPDPLIGTV EQTPEFQAFH AMLASSENED SEPTPAMSTT
SALVQFLQES KKAKEKKKRR SAKDENTKKK PGTIGSSVPK GTTHEKRPPL ELSALRPAPS
TPADVAEQKA KAIQLAKAQQ LQDRRDAQCA EAAGISFEMF QKLPKKAKAN LRRQQMSTPS
KKEPSSQDRS NAAHGPNETK AQGKAKTKAA PPPAVDTPSA SKPKKTKKPK PATILKPKDA
GAAPERKAIT ILKPPSASTH SSTLS
//
