ID A0A0N1BY02_9SPHN Unreviewed; 464 AA.
AC A0A0N1BY02;
DT 09-DEC-2015, integrated into UniProtKB/TrEMBL.
DT 09-DEC-2015, sequence version 1.
DT 27-MAR-2024, entry version 25.
DE SubName: Full=XRE family transcriptional regulator {ECO:0000313|EMBL:KPF89230.1};
GN ORFNames=IP83_02890 {ECO:0000313|EMBL:KPF89230.1};
OS Novosphingobium sp. AAP93.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Novosphingobium.
OX NCBI_TaxID=1523427 {ECO:0000313|EMBL:KPF89230.1, ECO:0000313|Proteomes:UP000037906};
RN [1] {ECO:0000313|EMBL:KPF89230.1, ECO:0000313|Proteomes:UP000037906}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AAP93 {ECO:0000313|EMBL:KPF89230.1,
RC ECO:0000313|Proteomes:UP000037906};
RA Zeng Y., Feng F., Liu Y., Koblizek M.;
RT "Novel Diversity of Limnic Aerobic Anoxygenic Phototrophic Bacteria as
RT Revealed by High-throughput Strain Identification and Genome Sequencing.";
RL Submitted (AUG-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the short-chain fatty acyl-CoA assimilation
CC regulator (ScfR) family. {ECO:0000256|ARBA:ARBA00007227}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KPF89230.1}.
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DR EMBL; LJHZ01000016; KPF89230.1; -; Genomic_DNA.
DR RefSeq; WP_054120706.1; NZ_LJHZ01000016.1.
DR AlphaFoldDB; A0A0N1BY02; -.
DR STRING; 1523427.IP83_02890; -.
DR PATRIC; fig|1523427.4.peg.1172; -.
DR OrthoDB; 1123084at2; -.
DR Proteomes; UP000037906; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00093; HTH_XRE; 1.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR026281; HTH_RamB.
DR InterPro; IPR010359; IrrE_HExxH.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR018653; ScfR_C.
DR PANTHER; PTHR46797; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR46797:SF23; HTH-TYPE TRANSCRIPTIONAL REGULATOR PRPR; 1.
DR Pfam; PF13560; HTH_31; 1.
DR Pfam; PF06114; Peptidase_M78; 1.
DR Pfam; PF09856; ScfRs; 1.
DR PIRSF; PIRSF019251; Rv0465c; 1.
DR SMART; SM00530; HTH_XRE; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 12..66
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
SQ SEQUENCE 464 AA; 51141 MW; 85A1159D758531E8 CRC64;
MESRPLYLGP RLKRLRRELG LTQAVMAEDL AISPSYIALL ERNQRPLTAD LLLRLAKAYK
LDVSELAADE RDDYARRLSD VLKDPIFAEI DLPALEVADV ATSYPGITEA MLRLHTAYMR
EQQALAGLRG GASTEADPLA EARRFVAQRR NYFPALDSKA EALAEEIEKL GGLQEGGLAE
YLRSQGLRVR LMPAEIMMDA LRRYDRHAEQ LLIDEALGPQ ARRWQMALHI AYTALRSEIA
AMVRGASFSS ETAAQLVRRA LAAYGAAALI MPYDRFARAV EARAYDIEAL SGQFGASFEQ
VAHRLTTLNR PGQERVPFFF IRVDAAGNVS KRLDGAGFPF AAHGGGCPLW TLHDCFRRPG
EVLTQWLELP NGERFFSVAH SVTSGGGAHG KPAVRRAIAL GCTAEHAPKL IYARGEQPAA
TPIGVTCRLC NRATCTARAE PPLGREILPD DYRKTPEPFV FAES
//
