ID A0A0N5AGD6_9BILA Unreviewed; 569 AA.
AC A0A0N5AGD6;
DT 09-DEC-2015, integrated into UniProtKB/TrEMBL.
DT 09-DEC-2015, sequence version 1.
DT 27-MAR-2024, entry version 23.
DE SubName: Full=Nucleoporin Ndc1 {ECO:0000313|WBParaSite:SMUV_0000338101-mRNA-1};
OS Syphacia muris.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Spirurina; Oxyuridomorpha; Oxyuroidea; Oxyuridae; Syphacia.
OX NCBI_TaxID=451379 {ECO:0000313|Proteomes:UP000046393, ECO:0000313|WBParaSite:SMUV_0000338101-mRNA-1};
RN [1] {ECO:0000313|WBParaSite:SMUV_0000338101-mRNA-1}
RP IDENTIFICATION.
RG WormBaseParasite;
RL Submitted (FEB-2017) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004141}. Nucleus membrane
CC {ECO:0000256|ARBA:ARBA00004232}; Multi-pass membrane protein
CC {ECO:0000256|ARBA:ARBA00004232}. Nucleus, nuclear pore complex
CC {ECO:0000256|ARBA:ARBA00004567}.
CC -!- SIMILARITY: Belongs to the NDC1 family.
CC {ECO:0000256|ARBA:ARBA00005760}.
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DR AlphaFoldDB; A0A0N5AGD6; -.
DR STRING; 451379.A0A0N5AGD6; -.
DR WBParaSite; SMUV_0000338101-mRNA-1; SMUV_0000338101-mRNA-1; SMUV_0000338101.
DR Proteomes; UP000046393; Unplaced.
DR GO; GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
DR GO; GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.
DR GO; GO:0015031; P:protein transport; IEA:UniProtKB-KW.
DR InterPro; IPR019049; Nucleoporin_prot_Ndc1/Nup.
DR PANTHER; PTHR13269:SF6; NUCLEOPORIN NDC1; 1.
DR PANTHER; PTHR13269; UNCHARACTERIZED; 1.
DR Pfam; PF09531; Ndc1_Nup; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW mRNA transport {ECO:0000256|ARBA:ARBA00022816};
KW Nuclear pore complex {ECO:0000256|ARBA:ARBA00023132};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Protein transport {ECO:0000256|ARBA:ARBA00022927};
KW Translocation {ECO:0000256|ARBA:ARBA00023010};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692, ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}; Transport {ECO:0000256|ARBA:ARBA00022448}.
FT TRANSMEM 66..88
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 108..131
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 143..170
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 176..196
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 233..257
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 263..284
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
SQ SEQUENCE 569 AA; 64228 MW; 576DD45E375817A6 CRC64;
MEDRTDVSEI NGFPHPFLLD DLDDQSRTVF SPQTISSTAN RKVVSVEDSA IRWFSNIMFC
RKKNAVLLYS GIASVFFMLT AALLRLSLLH PVTSVSNAFL TLVSPGVWLL LFLYVVLDSI
CMMCIGIFLL KYDVEKSFSI WNYVPWVVFC GFFGSDLLKK CLLLLAGLGY SESFNSWIYV
FIVCAMSFVC SFWITFRFNY QLVFPAIELV PMTCIQAAFH TERDKVFRVI FPVARWILTL
VLIAGLPCFG WKIFSAILNV RCYFTWALLC FLQLYSHYMG VSILKGFVLQ RYTFELPELY
LGIINPLKNA PNLITALESN SITLKAFALW DLRDLAIKSG HPRNWDAVRE VCVGVLQHVK
SQLDQATSQI QRESYASLVL NEDQNKSSVQ TGPTILLANQ LYKDKNLRKR VLKSDISDVH
SENSSLIDTW IALLNKWSYS AANSHIIFSS YEANLAILCI ESLGMLIWHS YDEDGYGVVQ
KDLGSLISLL LQLVVGLDRY IRHNKQVRNE IVLSNLAVVN GLDSSVYSTI NRIACKFGTA
LSAIGLTPLE LDMLDTLTGL PQGVNGREP
//
