ID A0A0Q8QR65_9SPHN Unreviewed; 463 AA.
AC A0A0Q8QR65;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 27-MAR-2024, entry version 35.
DE SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:KRB87996.1};
GN ORFNames=ASE22_21260 {ECO:0000313|EMBL:KRB87996.1};
OS Sphingomonas sp. Root720.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Sphingomonas.
OX NCBI_TaxID=1736595 {ECO:0000313|EMBL:KRB87996.1, ECO:0000313|Proteomes:UP000051570};
RN [1] {ECO:0000313|Proteomes:UP000051570}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Root720 {ECO:0000313|Proteomes:UP000051570};
RA Garrido-Oter R., Bai Y.;
RL Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:KRB87996.1, ECO:0000313|Proteomes:UP000051570}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Root720 {ECO:0000313|EMBL:KRB87996.1,
RC ECO:0000313|Proteomes:UP000051570};
RA Schulze-Lefert P.;
RT "Functional overlap of the Arabidopsis leaf and root microbiotas.";
RL Submitted (NOV-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the short-chain fatty acyl-CoA assimilation
CC regulator (ScfR) family. {ECO:0000256|ARBA:ARBA00007227}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRB87996.1}.
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DR EMBL; LMID01000015; KRB87996.1; -; Genomic_DNA.
DR RefSeq; WP_056364950.1; NZ_LMID01000015.1.
DR AlphaFoldDB; A0A0Q8QR65; -.
DR STRING; 1736595.ASE22_21260; -.
DR Proteomes; UP000051570; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00093; HTH_XRE; 1.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR026281; HTH_RamB.
DR InterPro; IPR010359; IrrE_HExxH.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR018653; ScfR_C.
DR PANTHER; PTHR46797; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR46797:SF23; HTH-TYPE TRANSCRIPTIONAL REGULATOR PRPR; 1.
DR Pfam; PF12844; HTH_19; 1.
DR Pfam; PF06114; Peptidase_M78; 1.
DR Pfam; PF09856; ScfRs; 1.
DR PIRSF; PIRSF019251; Rv0465c; 1.
DR SMART; SM00530; HTH_XRE; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000051570};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 12..66
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
FT COILED 134..161
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 463 AA; 50742 MW; BF4703D42C4E7542 CRC64;
MAKQGILAGP RIKRLRRDHG HTQQAMAEML GISDSYLALI EGNRRPLTAG LILKLAELFD
FDIRSLSQEE PGGGAAAMRR RLSDPLFADL SIDRAELEAW IDNAPVGIEA FARLFDHWRE
GGGSGAAGQG PNPVMAARRE IERWRNHFAD LDAQAEQLAD ELRIGAGDLY GAIAERLRVK
HQLTIRILPF DVMPDRLRRL DLHARQLQLS ELLDPAARTF QAAFQLAQIE ARTGIDSLVA
GAAFGDRPAE RLYRRHVTSY FAAALMMPYG RFLRACETTG YDIQLLQRRF GAGFEQVAHR
LTTLQRVGAR GLPFFMLRID RAGQLSKGYA GASGSALIDA VHRCPLWAIH HGFEQPGRLV
RQLAELEDGS RWFTIARSVR HHGGAAGVPA AEHVVALGLA AEHAATLALA RGIDLGGPAE
PIGLGCTHCQ RVECVQRAAP PLGRALTINE RERGLAPFSF VGD
//
