ID A0A0R1QMT9_9LACO Unreviewed; 274 AA.
AC A0A0R1QMT9;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 27-MAR-2024, entry version 27.
DE SubName: Full=Transposase {ECO:0000313|EMBL:KRL43493.1};
GN ORFNames=FD29_GL000875 {ECO:0000313|EMBL:KRL43493.1};
OS Companilactobacillus mindensis DSM 14500.
OC Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae;
OC Companilactobacillus.
OX NCBI_TaxID=1423770 {ECO:0000313|EMBL:KRL43493.1, ECO:0000313|Proteomes:UP000050872};
RN [1] {ECO:0000313|EMBL:KRL43493.1, ECO:0000313|Proteomes:UP000050872}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 14500 {ECO:0000313|EMBL:KRL43493.1,
RC ECO:0000313|Proteomes:UP000050872};
RX PubMed=26415554; DOI=10.1038/ncomms9322;
RA Sun Z., Harris H.M., McCann A., Guo C., Argimon S., Zhang W., Yang X.,
RA Jeffery I.B., Cooney J.C., Kagawa T.F., Liu W., Song Y., Salvetti E.,
RA Wrobel A., Rasinkangas P., Parkhill J., Rea M.C., O'Sullivan O., Ritari J.,
RA Douillard F.P., Paul Ross R., Yang R., Briner A.E., Felis G.E.,
RA de Vos W.M., Barrangou R., Klaenhammer T.R., Caufield P.W., Cui Y.,
RA Zhang H., O'Toole P.W.;
RT "Expanding the biotechnology potential of lactobacilli through comparative
RT genomics of 213 strains and associated genera.";
RL Nat. Commun. 6:8322-8322(2015).
CC -!- SIMILARITY: In the C-terminal section; belongs to the transposase 35
CC family. {ECO:0000256|ARBA:ARBA00008761}.
CC -!- SIMILARITY: In the N-terminal section; belongs to the transposase 2
CC family. {ECO:0000256|ARBA:ARBA00011044}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRL43493.1}.
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DR EMBL; AZEZ01000082; KRL43493.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0R1QMT9; -.
DR STRING; 1423770.FD29_GL000875; -.
DR PATRIC; fig|1423770.3.peg.901; -.
DR Proteomes; UP000050872; Unassembled WGS sequence.
DR GO; GO:0030127; C:COPII vesicle coat; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR GO; GO:0006888; P:endoplasmic reticulum to Golgi vesicle-mediated transport; IEA:InterPro.
DR GO; GO:0006886; P:intracellular protein transport; IEA:InterPro.
DR GO; GO:0032196; P:transposition; IEA:UniProtKB-KW.
DR InterPro; IPR010095; Cas12f1-like_TNB.
DR InterPro; IPR001959; Transposase.
DR InterPro; IPR036174; Znf_Sec23_Sec24_sf.
DR NCBIfam; NF040570; guided_TnpB; 1.
DR NCBIfam; TIGR01766; IS200/IS605 family accessory protein TnpB-like domain; 1.
DR PANTHER; PTHR30405:SF20; RNA-GUIDED DNA ENDONUCLEASE INSQ-RELATED; 1.
DR PANTHER; PTHR30405; TRANSPOSASE; 1.
DR Pfam; PF01385; OrfB_IS605; 1.
DR Pfam; PF07282; OrfB_Zn_ribbon; 1.
DR SUPFAM; SSF82919; Zn-finger domain of Sec23/24; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Transposition {ECO:0000256|ARBA:ARBA00022578}.
FT DOMAIN 66..185
FT /note="Probable transposase IS891/IS1136/IS1341"
FT /evidence="ECO:0000259|Pfam:PF01385"
FT DOMAIN 197..269
FT /note="Cas12f1-like TNB"
FT /evidence="ECO:0000259|Pfam:PF07282"
FT COILED 106..140
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 274 AA; 32018 MW; 9E2D7AF0FF9D46C8 CRC64;
MNVYTGSVRF LDDKHIKVPK LGKLRIKGYK KEIFHDKQNI RIGTVTLCKD PCNRYFISLQ
LSSDTPFVER KVKTGSNIGI DLNTENFLTT SDNVVIDNPR FYRKMKKRLS KERRILSRRM
NRAKKEHRKL RESKNYQKQR LLVSKLNTKI RNQRNNFLNV LSTKLINNHD LIVAEELRSS
NMLKNHVLEM SISDVGWRTF LNMLAYKADL YGRKFLTIDP KNTTQTCSDC GHILSGADKL
TLTDRHWTCP VCHKHHLRDH NAAINILNKG LTKQ
//
