ID A0A0R1YBG6_9LACO Unreviewed; 319 AA.
AC A0A0R1YBG6;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 27-MAR-2024, entry version 29.
DE SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:KRM39863.1};
GN ORFNames=FC39_GL001016 {ECO:0000313|EMBL:KRM39863.1};
OS Lactobacillus hamsteri DSM 5661 = JCM 6256.
OC Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae;
OC Lactobacillus.
OX NCBI_TaxID=1423754 {ECO:0000313|EMBL:KRM39863.1, ECO:0000313|Proteomes:UP000051223};
RN [1] {ECO:0000313|EMBL:KRM39863.1, ECO:0000313|Proteomes:UP000051223}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 5661 {ECO:0000313|EMBL:KRM39863.1,
RC ECO:0000313|Proteomes:UP000051223};
RX PubMed=26415554; DOI=10.1038/ncomms9322;
RA Sun Z., Harris H.M., McCann A., Guo C., Argimon S., Zhang W., Yang X.,
RA Jeffery I.B., Cooney J.C., Kagawa T.F., Liu W., Song Y., Salvetti E.,
RA Wrobel A., Rasinkangas P., Parkhill J., Rea M.C., O'Sullivan O., Ritari J.,
RA Douillard F.P., Paul Ross R., Yang R., Briner A.E., Felis G.E.,
RA de Vos W.M., Barrangou R., Klaenhammer T.R., Caufield P.W., Cui Y.,
RA Zhang H., O'Toole P.W.;
RT "Expanding the biotechnology potential of lactobacilli through comparative
RT genomics of 213 strains and associated genera.";
RL Nat. Commun. 6:8322-8322(2015).
CC -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC {ECO:0000256|ARBA:ARBA00009437}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRM39863.1}.
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DR EMBL; AZGI01000033; KRM39863.1; -; Genomic_DNA.
DR RefSeq; WP_025080655.1; NZ_BALY01000014.1.
DR AlphaFoldDB; A0A0R1YBG6; -.
DR STRING; 1423754.FC39_GL001016; -.
DR PATRIC; fig|1423754.3.peg.1044; -.
DR eggNOG; COG0583; Bacteria.
DR OrthoDB; 9803735at2; -.
DR Proteomes; UP000051223; Unassembled WGS sequence.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR CDD; cd05466; PBP2_LTTR_substrate; 1.
DR Gene3D; 3.40.190.290; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR005119; LysR_subst-bd.
DR InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30126; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR30126:SF40; HTH-TYPE TRANSCRIPTIONAL REGULATOR GLTR; 1.
DR Pfam; PF00126; HTH_1; 1.
DR Pfam; PF03466; LysR_substrate; 1.
DR PRINTS; PR00039; HTHLYSR.
DR SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50931; HTH_LYSR; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000051223};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 8..65
FT /note="HTH lysR-type"
FT /evidence="ECO:0000259|PROSITE:PS50931"
SQ SEQUENCE 319 AA; 37052 MW; 18237E9AA6299126 CRC64;
MPKTDTILSA KSLRYFLQLI DTMNYTQAAQ ILGITQPALT QQIKKLERAI GAPLFGQMGK
KLYLTEAGKQ MQSAAVVLLN TTNSVVNSIQ EFTQEDKGNI SIGCLKTIEM DIVREFLLAF
NKKYPNVTID VKTFSRKELW HQLDNNLIDL AIMYLPDNTK RQSTSLQRQY ENMDVYKDRM
VILTHKDTVK AGGEYPVSRF VKTEWVTYPD NYYLTELLKE SFGTKNNPKI AIKFASAEQL
IKIAEVSKYD TCVTKSFYKK YKQKINLKPI YLKQDKNFTI SLVYRKGKLE IPRIKNFLKH
WNIFLDKEDY SSRLEEDIN
//
