ID A0A0R1YCN3_9LACO Unreviewed; 274 AA.
AC A0A0R1YCN3;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 27-MAR-2024, entry version 23.
DE SubName: Full=IS1470, transposase {ECO:0000313|EMBL:KRM40141.1};
GN ORFNames=FC39_GL000878 {ECO:0000313|EMBL:KRM40141.1};
OS Lactobacillus hamsteri DSM 5661 = JCM 6256.
OC Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae;
OC Lactobacillus.
OX NCBI_TaxID=1423754 {ECO:0000313|EMBL:KRM40141.1, ECO:0000313|Proteomes:UP000051223};
RN [1] {ECO:0000313|EMBL:KRM40141.1, ECO:0000313|Proteomes:UP000051223}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 5661 {ECO:0000313|EMBL:KRM40141.1,
RC ECO:0000313|Proteomes:UP000051223};
RX PubMed=26415554; DOI=10.1038/ncomms9322;
RA Sun Z., Harris H.M., McCann A., Guo C., Argimon S., Zhang W., Yang X.,
RA Jeffery I.B., Cooney J.C., Kagawa T.F., Liu W., Song Y., Salvetti E.,
RA Wrobel A., Rasinkangas P., Parkhill J., Rea M.C., O'Sullivan O., Ritari J.,
RA Douillard F.P., Paul Ross R., Yang R., Briner A.E., Felis G.E.,
RA de Vos W.M., Barrangou R., Klaenhammer T.R., Caufield P.W., Cui Y.,
RA Zhang H., O'Toole P.W.;
RT "Expanding the biotechnology potential of lactobacilli through comparative
RT genomics of 213 strains and associated genera.";
RL Nat. Commun. 6:8322-8322(2015).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRM40141.1}.
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DR EMBL; AZGI01000028; KRM40141.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0R1YCN3; -.
DR STRING; 1423754.FC39_GL000878; -.
DR PATRIC; fig|1423754.3.peg.904; -.
DR eggNOG; COG2826; Bacteria.
DR Proteomes; UP000051223; Unassembled WGS sequence.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR025246; IS30-like_HTH.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR012337; RNaseH-like_sf.
DR NCBIfam; NF033563; transpos_IS30; 1.
DR PANTHER; PTHR10948; TRANSPOSASE; 1.
DR PANTHER; PTHR10948:SF23; TRANSPOSASE INSI FOR INSERTION SEQUENCE ELEMENT IS30A-RELATED; 1.
DR Pfam; PF13936; HTH_38; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
DR PROSITE; PS50994; INTEGRASE; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000051223}.
FT DOMAIN 168..274
FT /note="Integrase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50994"
SQ SEQUENCE 274 AA; 32303 MW; DFAFFEF0E6893B19 CRC64;
MPKHSKGKHL SFEQRVIIQT RLNDGFSLRA IARELDCSPS TISYEVKRGT VLLYHDKKKR
YKAEHGDKVY HSHRQNCGRK SDFLKKSDFI KYVNKHFYED GWSLDVCAHR CRAIGLFTRK
QVVCTRTLYN YVGQCLMDIR NSDLPEKLKR NTKAHHVRKN KKKLGRSIEE RPKEIDDRKE
FGHWECDLVL GHKTKNDQAL LTLSERMSRE FLILRIPDKN AASVMTAFRA LRKQYSEHWN
EIFKTITTDN DSEFADLSNL EEASKTLVYY AYPR
//
