ID A0A0V0TM23_9BILA Unreviewed; 636 AA.
AC A0A0V0TM23;
DT 16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT 16-MAR-2016, sequence version 1.
DT 27-MAR-2024, entry version 33.
DE RecName: Full=U3 small nucleolar RNA-associated protein 15 homolog {ECO:0000256|ARBA:ARBA00018260};
GN Name=UTP15 {ECO:0000313|EMBL:KRX40095.1};
GN ORFNames=T05_16091 {ECO:0000313|EMBL:KRX40095.1};
OS Trichinella murrelli.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC Trichinellida; Trichinellidae; Trichinella.
OX NCBI_TaxID=144512 {ECO:0000313|EMBL:KRX40095.1, ECO:0000313|Proteomes:UP000055048};
RN [1] {ECO:0000313|EMBL:KRX40095.1, ECO:0000313|Proteomes:UP000055048}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ISS417 {ECO:0000313|EMBL:KRX40095.1};
RA Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT "Evolution of Trichinella species and genotypes.";
RL Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus
CC {ECO:0000256|ARBA:ARBA00004604}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRX40095.1}.
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DR EMBL; JYDJ01000211; KRX40095.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0V0TM23; -.
DR Proteomes; UP000055048; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
DR GO; GO:0006397; P:mRNA processing; IEA:InterPro.
DR GO; GO:0006364; P:rRNA processing; IEA:InterPro.
DR CDD; cd01725; LSm2; 1.
DR Gene3D; 2.30.30.100; -; 1.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 2.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR010920; LSM_dom_sf.
DR InterPro; IPR001163; Sm_dom_euk/arc.
DR InterPro; IPR018983; U3_snoRNA-assocProt_15_C.
DR InterPro; IPR016654; U6_snRNA_Lsm2.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR19924:SF26; U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 15 HOMOLOG; 1.
DR PANTHER; PTHR19924; UTP15 U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 15 FAMILY MEMBER; 1.
DR Pfam; PF01423; LSM; 1.
DR Pfam; PF09384; UTP15_C; 1.
DR Pfam; PF00400; WD40; 2.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00651; Sm; 1.
DR SMART; SM00320; WD40; 5.
DR SUPFAM; SSF50182; Sm-like ribonucleoproteins; 1.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 3.
DR PROSITE; PS50294; WD_REPEATS_REGION; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000055048};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius};
KW WD repeat {ECO:0000256|ARBA:ARBA00022574, ECO:0000256|PROSITE-
KW ProRule:PRU00221}.
FT TRANSMEM 72..94
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT REPEAT 201..232
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 247..273
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 314..355
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT DOMAIN 548..613
FT /note="Sm"
FT /evidence="ECO:0000259|SMART:SM00651"
SQ SEQUENCE 636 AA; 72878 MW; 747C9EF55C6E81B4 CRC64;
MVEIKAQMTT LDYFAPLIQR VFCGVVLERK TSKPSFLSDD HGHTEWMQAK KEDSEGFFLH
RKCPFRSFQQ NYVYYGIPVD QIEICFVFLI AYAMRNNMSY FKETEIISYY PGGRPPTDEE
VYFQSFKFPV TFEEVAPITD VDLCAVEPYR CAVSCSAKVQ LYDCKAMQQT QTLGNFRRTA
YGGSFRNDGR LLVAGGEDKK VKFTSTGYKV VSFSDDATIK LWDLGSESLC RDFLSHKDGI
RCGVCRDENF IISGSYDHTV CLWDNRQQNP VMQLEHSFPI ESVALHINDS MLLTAGGTVV
TVWDLVAGKV LAKLSQHHKT ITCVRFCTSY KRILSGSLDR HIKVYDLNSF SNVHSIEYPS
PILSFDIKSD DRYLVVGMNS GLVSFKERKA KAKTVSKKSR KLQMRKFDVV VPRDERQWLP
KHDFMLKTFE HRAALDYVIK PSQSNKKPEV AVSIFLELIR RGALIKALRK RPEVELMPIL
KFINKFLNNV RFTEILLTVV EKLLDIYGPA MLELSENVRH EFKKMKHFMN AEAQQLKKIA
CATGTLSVVL ALAREKPGES KMEIDITGNL HSVDQYLNLK LNDVSISDPE KYPHLVSVKN
CFIRGSVVRY VHLPADEVDT QLLQDATRKE HMLSRK
//
