ID A0A0V0UN98_9BILA Unreviewed; 606 AA.
AC A0A0V0UN98;
DT 16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT 16-MAR-2016, sequence version 1.
DT 27-MAR-2024, entry version 23.
DE SubName: Full=Retrovirus-related Pol polyprotein from transposon TNT 1-94 {ECO:0000313|EMBL:KRX52812.1};
GN ORFNames=T09_14841 {ECO:0000313|EMBL:KRX52812.1};
OS Trichinella sp. T9.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC Trichinellida; Trichinellidae; Trichinella.
OX NCBI_TaxID=181606 {ECO:0000313|EMBL:KRX52812.1, ECO:0000313|Proteomes:UP000054681};
RN [1] {ECO:0000313|EMBL:KRX52812.1, ECO:0000313|Proteomes:UP000054681}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ISS409 {ECO:0000313|EMBL:KRX52812.1};
RA Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT "Evolution of Trichinella species and genotypes.";
RL Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- COFACTOR:
CC Name=[4Fe-4S] cluster; Xref=ChEBI:CHEBI:49883;
CC Evidence={ECO:0000256|ARBA:ARBA00001966};
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRX52812.1}.
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DR EMBL; JYDN01000225; KRX52812.1; -; Genomic_DNA.
DR Proteomes; UP000054681; Unassembled WGS sequence.
DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR GO; GO:0006269; P:DNA replication, synthesis of RNA primer; IEA:UniProtKB-KW.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR007238; DNA_primase_lsu_euk/arc.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR013103; RVT_2.
DR PANTHER; PTHR42648:SF18; INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR42648; TRANSPOSASE, PUTATIVE-RELATED; 1.
DR Pfam; PF04104; DNA_primase_lrg; 1.
DR Pfam; PF00665; rve; 1.
DR Pfam; PF07727; RVT_2; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50994; INTEGRASE; 1.
PE 4: Predicted;
KW 4Fe-4S {ECO:0000256|ARBA:ARBA00022485};
KW DNA replication {ECO:0000256|ARBA:ARBA00022705};
KW Iron {ECO:0000256|ARBA:ARBA00023004};
KW Iron-sulfur {ECO:0000256|ARBA:ARBA00023014};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Primosome {ECO:0000256|ARBA:ARBA00022515};
KW Reference proteome {ECO:0000313|Proteomes:UP000054681}.
FT DOMAIN 167..330
FT /note="Integrase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50994"
FT REGION 397..471
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 397..414
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 424..462
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 606 AA; 69954 MW; E4478CE66CF24DC3 CRC64;
MQVASVGGAR YFLSFIDDFS RKSFVYFLKH KNEALPKMFN LNSNLNAFSQ ILSVTSFPLC
MRRLYDELKS AHHLRHGGRM QLGLFLKKIG LSLNESLKFW EYHFRPKIDA EKFQRQYAYS
IRHNYGEEGK RADYAAYSCL KIIMNNPPGI GDFHGCPFKH CDAEHLQQLL KNCGIHKDNI
KNSIMHPTII TTXFIDDFSR KSFVYFLKHK NEALPKFKDF IAVVERQTSK RVKCLRTDNG
REYVNNMFAE FLMRKGIRHE RTIPETPQQN GVAERMNRTL VEKARTMLID ANLSPDLWAE
AVGTANYLRN RCPTKALRKV TPEEAWSGRK PNLAHLKIFG CLAMVHVASG QRKKWDPKSE
ERIFVGYCET SKGYRTVDRK TKKMYVTRDV KFLESRFPGT QSSKEESTNS LMNPDVGEEA
VIVWTSQDSG STEMNPNPSV PPKVDTDSNE STGQSPQPSV KTSPEELRRP LRNRFPNRNI
FNADFLLFQT QVREQSDPIS YEEALNRPDA KEWLKAINEE LASHHENQSW ETAVLPPNKK
AIKSKWVFKT KYKVDGTIEK RKARLVARGY PQRQGIDYED TFAPTLGYSS LRYLLSLAAK
YNLEVD
//
