ID   A0A0V0W6B3_9BILA        Unreviewed;      1102 AA.
AC   A0A0V0W6B3;
DT   16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT   16-MAR-2016, sequence version 1.
DT   27-MAR-2024, entry version 24.
DE   SubName: Full=CGG triplet repeat-binding protein 1 {ECO:0000313|EMBL:KRX71200.1};
GN   Name=Cggbp1 {ECO:0000313|EMBL:KRX71200.1};
GN   ORFNames=T06_5215 {ECO:0000313|EMBL:KRX71200.1};
OS   Trichinella sp. T6.
OC   Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC   Trichinellida; Trichinellidae; Trichinella.
OX   NCBI_TaxID=92179 {ECO:0000313|EMBL:KRX71200.1, ECO:0000313|Proteomes:UP000054673};
RN   [1] {ECO:0000313|EMBL:KRX71200.1, ECO:0000313|Proteomes:UP000054673}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ISS34 {ECO:0000313|EMBL:KRX71200.1};
RA   Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT   "Evolution of Trichinella species and genotypes.";
RL   Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KRX71200.1}.
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DR   EMBL; JYDK01000251; KRX71200.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A0V0W6B3; -.
DR   STRING; 92179.A0A0V0W6B3; -.
DR   Proteomes; UP000054673; Unassembled WGS sequence.
DR   GO; GO:0005634; C:nucleus; IEA:InterPro.
DR   GO; GO:0003690; F:double-stranded DNA binding; IEA:InterPro.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR   GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IEA:InterPro.
DR   Gene3D; 2.20.25.240; -; 1.
DR   InterPro; IPR033375; Cggbp1.
DR   InterPro; IPR007021; DUF659.
DR   InterPro; IPR008906; HATC_C_dom.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR007588; Znf_FLYWCH.
DR   PANTHER; PTHR32344; U1-TYPE DOMAIN-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR32344:SF1; U1-TYPE DOMAIN-CONTAINING PROTEIN; 1.
DR   Pfam; PF05699; Dimer_Tnp_hAT; 1.
DR   Pfam; PF04937; DUF659; 2.
DR   Pfam; PF04500; FLYWCH; 1.
DR   SUPFAM; SSF53098; Ribonuclease H-like; 2.
PE   4: Predicted;
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW   Reference proteome {ECO:0000313|Proteomes:UP000054673};
KW   Zinc {ECO:0000256|ARBA:ARBA00022833}.
FT   DOMAIN          165..322
FT                   /note="DUF659"
FT                   /evidence="ECO:0000259|Pfam:PF04937"
FT   DOMAIN          426..481
FT                   /note="FLYWCH-type"
FT                   /evidence="ECO:0000259|Pfam:PF04500"
FT   DOMAIN          731..888
FT                   /note="DUF659"
FT                   /evidence="ECO:0000259|Pfam:PF04937"
FT   DOMAIN          1061..1096
FT                   /note="HAT C-terminal dimerisation"
FT                   /evidence="ECO:0000259|Pfam:PF05699"
SQ   SEQUENCE   1102 AA;  125529 MW;  9292842019155277 CRC64;
     MNCAVKRVHF IFPQSVDFSF THFLLRLLCR SYSRSATSTS FKMPKVKSKP SKKLIDLVNE
     YGSDILSTDN TVLFCKACGK TINHEKKYFV YQHLQTAKHK SATEKMKTES KQACLLNTFV
     ADSSSKSQFP ADLCMAFIDA GIPLWKLENK SLRSFLEKYT KQHIPSESSL RKHYIDSNFN
     NVMDRVRREV AYNKIWISID ETIDPVGRFV ANVVIGTLEA DQPSKEYLLT SEVLEKSNSS
     TIAQLFTSSL AVLWPEGIRH ENVLLFVTDA APYMKKAAGA LKVLFPNMLH LTCLAHGLHR
     IAEHIRCLFP DVDRLISNMK KVFLKAPSRV QLFKEMAPEV PLPPQPVLTR WGTWLSAVFY
     YAANFKKIQE IISCFEEEES TAVKIVHEIM QKESLLCDLV FIASNFTNFV PAITYLEKRS
     ETLLRFVRNR GGSTSLVSQG RTYKLRYTNK QKKHWVCSKG REGCKGVIWT NLDVTYVITQ
     KDHIESCPVN EHLAYKMEKK AVLKKRSAEE TKSILAIYDE VSAASAVPST FGHFPPSRRI
     IFKRVKSTMY SHRSKRYLKL PEHRRDQQIP DAFRTTMAGE DFLPWQSASR HILVLATGSN
     IRLMATRRTW ALDGTFKIVP QWYQQLFTIH AFLAGKLVLA VYCLCTDKDI PTYGFILSRS
     GITGNPQPTE KMKTESKQAC LLNTFVADSS SKSQFPADLC MAFIDAGIPL WKLENKSLRS
     FLEKYTKQHI PSESSLRKHY IDSNFNNVMD RVRREVAYNK IWISIDETID PVGRFVANVV
     IGTLEADQPS KEYLLTSEVL EKSNSSTIAQ LFTSSLAVLW PEGIRHENVL LFVTDAAPYM
     KKAAGALKVL FPNMLHLTCL AHGLHRIAEH IRCLFPDVDR LISNMKKVFL KAPSRVQLFK
     EMAPEVPLPP QPVLTRWGTW LSAVFYYAAN FKKIQEIISC FEEEESTAVK IVHEIMQKES
     LLCDLVFIAS NFTNFVPAIT YLEKRSETLV DRLQAFDEVI DNIHKIPGIV GEDIKSKCDK
     VISANKDLKE IKSIAEVLKG NSNAQVIGMN IESAVCFKYA PVTSAEVERS FSQLKYILSD
     RRYSLTPDNL KKMLVIMCNQ TR
//