ID   A0A0V0Z5F2_9BILA        Unreviewed;       494 AA.
AC   A0A0V0Z5F2;
DT   16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT   16-MAR-2016, sequence version 1.
DT   27-MAR-2024, entry version 16.
DE   RecName: Full=Integrase catalytic domain-containing protein {ECO:0008006|Google:ProtNLM};
GN   ORFNames=T12_4326 {ECO:0000313|EMBL:KRY07643.1};
OS   Trichinella patagoniensis.
OC   Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC   Trichinellida; Trichinellidae; Trichinella.
OX   NCBI_TaxID=990121 {ECO:0000313|EMBL:KRY07643.1, ECO:0000313|Proteomes:UP000054783};
RN   [1] {ECO:0000313|EMBL:KRY07643.1, ECO:0000313|Proteomes:UP000054783}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ISS2496 {ECO:0000313|EMBL:KRY07643.1};
RA   Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT   "Evolution of Trichinella species and genotypes.";
RL   Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KRY07643.1}.
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DR   EMBL; JYDQ01000425; KRY07643.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A0V0Z5F2; -.
DR   STRING; 990121.A0A0V0Z5F2; -.
DR   Proteomes; UP000054783; Unassembled WGS sequence.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR   Gene3D; 1.10.340.70; -; 1.
DR   Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR   InterPro; IPR040676; DUF5641.
DR   InterPro; IPR000253; FHA_dom.
DR   InterPro; IPR001584; Integrase_cat-core.
DR   InterPro; IPR041588; Integrase_H2C2.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR036397; RNaseH_sf.
DR   PANTHER; PTHR22955; RETROTRANSPOSON; 1.
DR   PANTHER; PTHR22955:SF69; RNA-DIRECTED DNA POLYMERASE; 1.
DR   Pfam; PF18701; DUF5641; 1.
DR   Pfam; PF17921; Integrase_H2C2; 1.
DR   SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR   PROSITE; PS50006; FHA_DOMAIN; 1.
DR   PROSITE; PS50994; INTEGRASE; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000054783};
KW   Signal {ECO:0000256|SAM:SignalP}.
FT   SIGNAL          1..28
FT                   /evidence="ECO:0000256|SAM:SignalP"
FT   CHAIN           29..494
FT                   /note="Integrase catalytic domain-containing protein"
FT                   /evidence="ECO:0000256|SAM:SignalP"
FT                   /id="PRO_5006873468"
FT   DOMAIN          147..336
FT                   /note="Integrase catalytic"
FT                   /evidence="ECO:0000259|PROSITE:PS50994"
FT   DOMAIN          331..361
FT                   /note="FHA"
FT                   /evidence="ECO:0000259|PROSITE:PS50006"
SQ   SEQUENCE   494 AA;  56536 MW;  923DC0993748C517 CRC64;
     MISRICLCQT LFAFLVTSHL LVLIQVSAYG PGSHRRKDLQ QFNPYLDENG ILRVGGRLAS
     SELPQETRNP MLLPHGDGVV KLLIQHVHEQ QLHAGVDQTL AATRKRFWIT RGRSAVKEVV
     RKCVVCRRVT AKPFEQQMAE LPPERTEPVG PFVYVGVDFA GPIMARCDGK TLTLLKTYVC
     IFTCMVVRAI HLELVPDMTV DSFLRALRRF ISRRGRPRLL QSDNFQTFHL ASRFLRPLCN
     SRNWKVVQDH LAKEGIEWKF ITERAPWCGG YWERLVRSIK VALSKVLGRC HAKPDELRTV
     LCEIEARIND RPLTIVSDRP DDQLALTPAH FLIGRELSSL PDRDCDGKQV QGDNRVLSRL
     HRRWRYQRRL VDHLWTRWKQ EYLVTLSSRG KWRKLQEKPR IGDVVLIIEP NIPRSRAPFG
     RIVELFCSRD GMARSARLQT ARGLVTRSVR SLERSDGLGP SGGRLLETVG TVIPVPEDQQ
     CGLFETAFRH GSTQ
//