ID A0A0V1MBX9_9BILA Unreviewed; 1197 AA.
AC A0A0V1MBX9;
DT 16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT 16-MAR-2016, sequence version 1.
DT 27-MAR-2024, entry version 30.
DE SubName: Full=Helicase SKI2W {ECO:0000313|EMBL:KRZ69091.1};
DE Flags: Fragment;
GN Name=SKIV2L {ECO:0000313|EMBL:KRZ69091.1};
GN ORFNames=T10_12130 {ECO:0000313|EMBL:KRZ69091.1};
OS Trichinella papuae.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC Trichinellida; Trichinellidae; Trichinella.
OX NCBI_TaxID=268474 {ECO:0000313|EMBL:KRZ69091.1, ECO:0000313|Proteomes:UP000054843};
RN [1] {ECO:0000313|EMBL:KRZ69091.1, ECO:0000313|Proteomes:UP000054843}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ISS1980 {ECO:0000313|EMBL:KRZ69091.1};
RA Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT "Evolution of Trichinella species and genotypes.";
RL Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRZ69091.1}.
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DR EMBL; JYDO01000145; KRZ69091.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0V1MBX9; -.
DR STRING; 268474.A0A0V1MBX9; -.
DR Proteomes; UP000054843; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0003724; F:RNA helicase activity; IEA:InterPro.
DR GO; GO:0006401; P:RNA catabolic process; IEA:InterPro.
DR CDD; cd18795; SF2_C_Ski2; 1.
DR Gene3D; 1.10.3380.30; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR016438; SKI2-like.
DR InterPro; IPR012961; Ski2/MTR4_C.
DR InterPro; IPR040801; Ski2_N.
DR PANTHER; PTHR12131; ATP-DEPENDENT RNA AND DNA HELICASE; 1.
DR PANTHER; PTHR12131:SF8; HELICASE SKI2W; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF08148; DSHCT; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF17911; Ski2_N; 1.
DR PIRSF; PIRSF005198; Antiviral_helicase_SKI2; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM01142; DSHCT; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Helicase {ECO:0000256|ARBA:ARBA00022806, ECO:0000313|EMBL:KRZ69091.1};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000054843};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884}.
FT DOMAIN 279..435
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 514..716
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 171..212
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 171..206
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:KRZ69091.1"
SQ SEQUENCE 1197 AA; 137430 MW; C7A5E4B456282F94 CRC64;
LSIMENNSEK EGCDKPFQRW LLISQKNKLK DETKSIVFDE LFKQCCASSV SCLKTNEVPD
RFDTSNQCIY SSANVDRDYK TGGPANIEEP LPFDFESQNT LPLDMTIENN KNSDGIVGNS
PSLPFVPGGM EKEIAEKMAK QNMNCEIDET EEYSTCAPGL PRGFHFDLTE SELSSEEEHK
FDEHLAKQEK TESGAIKDKR ENEKETAEEN EAEENGIVPI ISDNPLHNNQ ALNELYKDGA
YHYASSIENI GTLEKFELLR PKMAKTFSFE LDLFQKQAIL CLEAGQSVFV AAHTSAGKTV
VADYAVALCH KSMTRAIYTS PIKALSNQKY RDFKQEYDEV GIVTGDIQMN ADSFCVVMTT
EILRSMLYNG SEVLRELEWV IFDEVHYVNN PERGVVWEEV IIMLPKHVKL ILLSATVSDV
MEFAEWIGRI KERKIFVVTT SKRPVPLEHH LYLGDVGTTK NVQVPIVNSS GKFLTDNFDN
AVRQKENSKA AKNYKNIYQP YTGTGMAEKN LWLSLIQHLK EKSLLPMVVF VFSRKMCDTL
ALMLLQSSSL DLTTASEKNV IRRFFNKSIS KLNKNDRTLR QITQLQRMCE RGIAVHHSGV
LPLMKEIVEM MFQEGRVRVL FATETFSMGI NMPAKTVVFN SIDKHDGRTA RLLNPGEYTQ
MAGRAGRRGL DSIGTVILLC RDKIPNISDL KTMILGVSPR MESQFRVTYT MILNLLRCQP
LSPEMMFGRS FVENLSFRGI RLLNKNIEAL TAEKNKSKFA KCFLCSEGNI KKFYRVAEEC
YDVARCLFAN MCKVIVPGMV VIVQLLEKLL IGVVLKKNFY RNEWLFEVFV PYRNLKPNND
KLSSDEKFNQ FLLYSTELDC NLVEPDFRYY SIIEFSLDRI VHFCNSSVNF SSHQIFDDWG
RSHNKLNECE EESILALIMH LYEIYGYYHR YPKEMRTFVP WCSMKNSHLD IAYLNRLRGG
ALRFRCLHCA KFREHFYEFC KLEVKQAELD ELKKKLKCFQ LRLIPSYEKK RNVLLTMKYI
DHDNMVQFPG RIACAINQYP LLYSQLLLNN KFANLTPDEV AAILSASACQ YKCKIVDFNE
PRLNELKKIV CDMDKRIRQM RQKCGDVDDD IDDQLNFGLM EVIQKWSLGV PFNELLEMTD
AQEGAIVRCI QRVCELCRDL KSASLLMGNS TLTTLIDDTM NSLKRDIVFA ASLYLNV
//
