ID A0A0V1MLH8_9BILA Unreviewed; 624 AA.
AC A0A0V1MLH8;
DT 16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT 16-MAR-2016, sequence version 1.
DT 27-MAR-2024, entry version 25.
DE RecName: Full=U4/U6 small nuclear ribonucleoprotein Prp31 {ECO:0000256|ARBA:ARBA00013538};
DE AltName: Full=Pre-mRNA-processing factor 31 {ECO:0000256|ARBA:ARBA00030766};
DE Flags: Fragment;
GN Name=prpf31 {ECO:0000313|EMBL:KRZ72679.1};
GN ORFNames=T10_5886 {ECO:0000313|EMBL:KRZ72679.1};
OS Trichinella papuae.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC Trichinellida; Trichinellidae; Trichinella.
OX NCBI_TaxID=268474 {ECO:0000313|EMBL:KRZ72679.1, ECO:0000313|Proteomes:UP000054843};
RN [1] {ECO:0000313|EMBL:KRZ72679.1, ECO:0000313|Proteomes:UP000054843}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ISS1980 {ECO:0000313|EMBL:KRZ72679.1};
RA Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT "Evolution of Trichinella species and genotypes.";
RL Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the PRP31 family.
CC {ECO:0000256|ARBA:ARBA00005572}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRZ72679.1}.
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DR EMBL; JYDO01000074; KRZ72679.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0V1MLH8; -.
DR Proteomes; UP000054843; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
DR GO; GO:0046540; C:U4/U6 x U5 tri-snRNP complex; IEA:InterPro.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0000244; P:spliceosomal tri-snRNP complex assembly; IEA:InterPro.
DR Gene3D; 1.10.287.4070; -; 1.
DR Gene3D; 1.10.246.90; Nop domain; 1.
DR InterPro; IPR042239; Nop_C.
DR InterPro; IPR002687; Nop_dom.
DR InterPro; IPR036070; Nop_dom_sf.
DR InterPro; IPR012976; NOSIC.
DR InterPro; IPR027105; Prp31.
DR InterPro; IPR019175; Prp31_C.
DR PANTHER; PTHR13904; PRE-MRNA SPLICING FACTOR PRP31; 1.
DR PANTHER; PTHR13904:SF0; U4_U6 SMALL NUCLEAR RIBONUCLEOPROTEIN PRP31; 1.
DR Pfam; PF01798; Nop; 1.
DR Pfam; PF09785; Prp31_C; 1.
DR SMART; SM00931; NOSIC; 1.
DR SUPFAM; SSF89124; Nop domain; 1.
DR PROSITE; PS51358; NOP; 1.
PE 3: Inferred from homology;
KW Membrane {ECO:0000256|SAM:Phobius};
KW mRNA processing {ECO:0000256|ARBA:ARBA00022664};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00023187};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000054843};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274,
KW ECO:0000313|EMBL:KRZ72679.1}; RNA-binding {ECO:0000256|ARBA:ARBA00022884};
KW Spliceosome {ECO:0000256|ARBA:ARBA00022728};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 35..55
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 334..452
FT /note="Nop"
FT /evidence="ECO:0000259|PROSITE:PS51358"
FT REGION 516..535
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:KRZ72679.1"
SQ SEQUENCE 624 AA; 69572 MW; 6B977F0BEFFFB10D CRC64;
LNYFEGSLDQ IVYSVFELTI LQLKFSTNHL NTMDAFWLVV ATTVVIYILF CSYAIKNPPK
YVKLKPPAFK AKIIAHRGEV AGGSTQNLVD RRIPLLEEVL KQTYPIPVNI DIKINNDKLI
EKNLVMSLAE ELLADLEEGE DDDYNVVEEA AQVEEKETRA KSIYNRVTAV AHLLHSDHFQ
GIMQRITNRI ENSHLTTISG PVESHPEYLL IVDANGLAAE IDNEIAVVHK FVRDKYAKRF
PELESLVPMP MEYVACVKEL GNDILDKAKH NEQLQNILLP STVIVISVTA STTQGECLTD
EELAVVMEGC EMAIQLNDAK LKIYQFVESR MHCIAPNLSV ILGPEIAAKL MGTAGGITQL
SKIPACNVLI LGSQKRMLSG FSSTTILPHT GYIYYTPLVQ SLPADLRRKA ARLVAAKCTL
AARIDSVHSH SDGSAGLKLA EEVRSKFEKW QEPPPKKLIK PLSKPLDQAS KKRGGRRIRK
MKERLGLTEL RRKANRMNFG QIEEDILQEH MGFSLGQAKS GGPGGRLRTP QVDQKSRARM
SKTLQRNMQK QQSTFGSVTS VRRQLAGTIS TVTFTPVQGL EIVNPQAAEK DKSAESTTAK
YFREDAEFIK VETPIPGHHN NQSK
//
