ID A0A0W0VSV5_9GAMM Unreviewed; 989 AA.
AC A0A0W0VSV5;
DT 16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT 16-MAR-2016, sequence version 1.
DT 24-JAN-2024, entry version 24.
DE RecName: Full=type I site-specific deoxyribonuclease {ECO:0000256|ARBA:ARBA00012654};
DE EC=3.1.21.3 {ECO:0000256|ARBA:ARBA00012654};
GN ORFNames=Llon_0031 {ECO:0000313|EMBL:KTD23146.1};
OS Legionella londiniensis.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Legionellales;
OC Legionellaceae; Legionella.
OX NCBI_TaxID=45068 {ECO:0000313|EMBL:KTD23146.1, ECO:0000313|Proteomes:UP000054997};
RN [1] {ECO:0000313|EMBL:KTD23146.1, ECO:0000313|Proteomes:UP000054997}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 49505 {ECO:0000313|EMBL:KTD23146.1,
RC ECO:0000313|Proteomes:UP000054997};
RA Burstein D., Amaro F., Zusman T., Lifshitz Z., Cohen O., Gilbert J.A.,
RA Pupko T., Shuman H.A., Segal G.;
RT "Genomic analysis of 38 Legionella species identifies large and diverse
RT effector repertoires.";
RL Submitted (NOV-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=Endonucleolytic cleavage of DNA to give random double-stranded
CC fragments with terminal 5'-phosphates, ATP is simultaneously
CC hydrolyzed.; EC=3.1.21.3; Evidence={ECO:0000256|ARBA:ARBA00000851};
CC -!- SIMILARITY: Belongs to the HsdR family.
CC {ECO:0000256|ARBA:ARBA00008598}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KTD23146.1}.
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DR EMBL; LNYK01000001; KTD23146.1; -; Genomic_DNA.
DR RefSeq; WP_058528056.1; NZ_UGON01000002.1.
DR AlphaFoldDB; A0A0W0VSV5; -.
DR STRING; 45068.Llon_0031; -.
DR PATRIC; fig|45068.5.peg.32; -.
DR OrthoDB; 9758243at2; -.
DR Proteomes; UP000054997; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0009035; F:type I site-specific deoxyribonuclease activity; IEA:UniProtKB-EC.
DR GO; GO:0009307; P:DNA restriction-modification system; IEA:UniProtKB-KW.
DR Gene3D; 3.90.1570.50; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 3.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR007409; Restrct_endonuc_type1_HsdR_N.
DR InterPro; IPR040980; SWI2_SNF2.
DR PANTHER; PTHR42927; HELICASE SUPERFAMILY 1 AND 2 DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR42927:SF1; HELICASE SUPERFAMILY 1 AND 2 DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF04313; HSDR_N; 1.
DR Pfam; PF18766; SWI2_SNF2; 1.
DR SMART; SM00487; DEXDc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Endonuclease {ECO:0000256|ARBA:ARBA00022759};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000054997};
KW Restriction system {ECO:0000256|ARBA:ARBA00022747}.
FT DOMAIN 289..483
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
SQ SEQUENCE 989 AA; 112558 MW; C36629B2017B6BEB CRC64;
MKFTNTSEAG FESTIVYSLI DGAGYQAGSP QDYDRSHAID LIKLTDFLWL TQPEIAENLN
LSIDSPKKTK FLHRLQGEIA KHGIINVLRK GIKHGPNNIT LFYGSPSKQN VKARELFEQN
IFSVTRQLRY SNNETQLALD MAIFINGLPI ATFELKNKLT KQTVEDAVQQ YKNDRDPKEL
LFQFGRCLVH FAVDDHEVRM CTHLKGKASW FLPFNKGYND GAGNPPNPDG LATDYLWKEI
LSRDRLTDII ENYAQVIEEK DEKTGKKKYK QIFPRYHQLT AVRKLLKHTS ENGAGKRYLI
QHSAGSGKSN SIAWLSHQLV GLEHDSKPIF DSILVVTDRR ILDKQIRDTI KSFAQVGSIV
GHAERSGDLR RFISEGKKII ITTVQKFPFI LSEIGNEHRQ NKFAIIIDEA HSSQGGRTAS
KMNMALSGSV SDTDDDESIE DKINELMESR KMLTNSSYFA FTATPKNKTL EIFGDPDPQP
DGTVKHLPFH SYTMKQAIQE GFILDVLKNY TPVASFYRLI KAVEDEPLFD SKKAQKKLRK
FVESNTHAIR EKTEIMVDHF HTHVMGHRKI GGAARAMVIT SGIDRAIEYF HAINHYLKYM
NFPYRAIVAF SGEHEYGGQK VTEASLNGFP SNLIADRIAE DPYRFLVVAD KFQTGYDEPL
MHTMYVDKPL SGIKAVQTLS RLNRAHPKKY DTFVLDFYNS VDAIEKAFSN YYRTTILSEE
TDPNKLHDLQ SDLDGYQVYS SEQIEHLIEL YLNGTEREKL DPILDNCVAV YSNDLDEDGQ
VDFKGKAKAF IRTYGFLSSI LPYNNTEWEK LSLFLNFLTP KLPTPKEDDH SLGILETIDM
DSYRAEVQAS ISIRLADEDA ELDAVPTSAG GRKPEPEMDQ LSNIIKTFND MFGNIEWKDK
DKIRKMIAEE IPGKVAADTA YQNAMKNSDK HNARVEHDRA LARVMVELIA DHTELYKQFS
DNPSFKKWLG DNIFGATYQS ESQNQSEQK
//