ID A0A0W7WIS1_9RHOB Unreviewed; 558 AA.
AC A0A0W7WIS1;
DT 16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT 16-MAR-2016, sequence version 1.
DT 24-JAN-2024, entry version 22.
DE RecName: Full=30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111};
GN ORFNames=AVJ23_11340 {ECO:0000313|EMBL:KUF10474.1};
OS Pseudoponticoccus marisrubri.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Roseobacteraceae; Pseudoponticoccus.
OX NCBI_TaxID=1685382 {ECO:0000313|EMBL:KUF10474.1, ECO:0000313|Proteomes:UP000054396};
RN [1] {ECO:0000313|EMBL:KUF10474.1, ECO:0000313|Proteomes:UP000054396}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SJ5A-1 {ECO:0000313|EMBL:KUF10474.1,
RC ECO:0000313|Proteomes:UP000054396};
RA Shamseldin A., Moawad H., Abd El-Rahim W.M., Sadowsky M.J.;
RL Submitted (DEC-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Binds mRNA; thus facilitating recognition of the initiation
CC point. It is needed to translate mRNA with a short Shine-Dalgarno (SD)
CC purine-rich sequence. {ECO:0000256|ARBA:ARBA00025604,
CC ECO:0000256|PIRNR:PIRNR002111}.
CC -!- SIMILARITY: Belongs to the bacterial ribosomal protein bS1 family.
CC {ECO:0000256|ARBA:ARBA00006767, ECO:0000256|PIRNR:PIRNR002111}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KUF10474.1}.
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DR EMBL; LPXO01000006; KUF10474.1; -; Genomic_DNA.
DR RefSeq; WP_058862314.1; NZ_LPXO01000006.1.
DR AlphaFoldDB; A0A0W7WIS1; -.
DR STRING; 1685382.AVJ23_11340; -.
DR OrthoDB; 9804077at2; -.
DR Proteomes; UP000054396; Unassembled WGS sequence.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR CDD; cd04465; S1_RPS1_repeat_ec2_hs2; 1.
DR CDD; cd05688; S1_RPS1_repeat_ec3; 1.
DR CDD; cd05691; S1_RPS1_repeat_ec6; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 5.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR000110; Ribosomal_bS1.
DR InterPro; IPR035104; Ribosomal_protein_S1-like.
DR InterPro; IPR003029; S1_domain.
DR NCBIfam; TIGR00717; rpsA; 1.
DR PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR PANTHER; PTHR10724:SF7; 30S RIBOSOMAL PROTEIN S1, CHLOROPLASTIC; 1.
DR Pfam; PF00575; S1; 6.
DR PIRSF; PIRSF002111; RpsA; 1.
DR PRINTS; PR00681; RIBOSOMALS1.
DR SMART; SM00316; S1; 6.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 6.
DR PROSITE; PS50126; S1; 6.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000054396};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Ribonucleoprotein {ECO:0000256|PIRNR:PIRNR002111};
KW Ribosomal protein {ECO:0000256|PIRNR:PIRNR002111,
KW ECO:0000313|EMBL:KUF10474.1}; RNA-binding {ECO:0000256|PIRNR:PIRNR002111}.
FT DOMAIN 25..91
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 109..175
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 196..264
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 281..351
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 368..438
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 455..523
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
SQ SEQUENCE 558 AA; 61254 MW; 3CD4761C13B9B67D CRC64;
MANASMEEFE ALLNESLEMD TPDEGTVVKG KVIAIEAGQA IIDVGYKMEG RVELKEFAEP
GEAPDVGVGD EVEVYLRAAE NARGEAVISR EMARREAAWD RLEKAYADDA RVEGAIFGRV
KGGFTVDLGG AVAFLPGSQV DVRPVRDAGP LMGLKQPFQI LKMDRRRGNI VVSRRAILEE
SRAEQRAEVI AKLQEGDAVD GVVKNITEYG AFVDLGGVDG LLHVTDMAWR RVNHPSEILS
IGETVKVQVI KINKETHRIS LGMKQLQEDP WDLVGVKYPL ASVHKGRVTN ITDYGAFVEL
EPGVEGLVHV SEMSWTKKNV HPGKIVSTSQ EVDVMVLEID PAKRRVSLGL KQTMRNPWEV
FSETHPEGTQ VEGEVKNITE FGLFIGLEGD IDGMVHLSDL SWDQRGEEAI QEYRKGDIVQ
AVVSEVDTEK ERISLSIKAL GGDKFAEATG GVRRGSIVTV EVTAIEDGGI EVEYEGMKSF
IRRSDLSRDR SEQRPERFSV GDKVDVRVTN IDMKTRRLGL SIKAREIAEE KEAVQQYGSS
DSGASLGDIL GAALKGDN
//
