ID A0A142YMN5_9PLAN Unreviewed; 613 AA.
AC A0A142YMN5;
DT 08-JUN-2016, integrated into UniProtKB/TrEMBL.
DT 08-JUN-2016, sequence version 1.
DT 24-JAN-2024, entry version 28.
DE SubName: Full=Putative diguanylate cyclase YdaM {ECO:0000313|EMBL:AMV40413.1};
DE EC=2.7.7.65 {ECO:0000313|EMBL:AMV40413.1};
GN Name=ydaM {ECO:0000313|EMBL:AMV40413.1};
GN ORFNames=VT85_23480 {ECO:0000313|EMBL:AMV40413.1};
OS Planctomyces sp. SH-PL62.
OC Bacteria; Planctomycetota; Planctomycetia; Planctomycetales;
OC Planctomycetaceae; Planctomyces.
OX NCBI_TaxID=1636152 {ECO:0000313|EMBL:AMV40413.1, ECO:0000313|Proteomes:UP000076365};
RN [1] {ECO:0000313|EMBL:AMV40413.1, ECO:0000313|Proteomes:UP000076365}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SH-PL62 {ECO:0000313|EMBL:AMV40413.1,
RC ECO:0000313|Proteomes:UP000076365};
RA van der Voort M., Raaijmakers J.M.;
RT "Genome minning of novel planctomycete species.";
RL Submitted (APR-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: Lacks conserved residue(s) required for the propagation of
CC feature annotation. {ECO:0000256|PROSITE-ProRule:PRU00169}.
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DR EMBL; CP011273; AMV40413.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A142YMN5; -.
DR STRING; 1636152.VT85_23480; -.
DR KEGG; plh:VT85_23480; -.
DR Proteomes; UP000076365; Chromosome.
DR GO; GO:0052621; F:diguanylate cyclase activity; IEA:UniProtKB-EC.
DR GO; GO:0000160; P:phosphorelay signal transduction system; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd01949; GGDEF; 1.
DR CDD; cd00130; PAS; 1.
DR CDD; cd00156; REC; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.40.50.2300; -; 1.
DR Gene3D; 3.30.565.10; Histidine kinase-like ATPase, C-terminal domain; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR011006; CheY-like_superfamily.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR036890; HATPase_C_sf.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR001610; PAC.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR000700; PAS-assoc_C.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013767; PAS_fold.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR001789; Sig_transdc_resp-reg_receiver.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR NCBIfam; TIGR00229; sensory_box; 1.
DR PANTHER; PTHR45138:SF9; DIGUANYLATE CYCLASE DGCM-RELATED; 1.
DR PANTHER; PTHR45138; REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM; 1.
DR Pfam; PF00990; GGDEF; 1.
DR Pfam; PF00989; PAS; 1.
DR Pfam; PF00072; Response_reg; 1.
DR SMART; SM00267; GGDEF; 1.
DR SMART; SM00086; PAC; 1.
DR SMART; SM00091; PAS; 1.
DR SUPFAM; SSF52172; CheY-like; 1.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS50887; GGDEF; 1.
DR PROSITE; PS50113; PAC; 1.
DR PROSITE; PS50112; PAS; 1.
DR PROSITE; PS50110; RESPONSE_REGULATORY; 1.
PE 4: Predicted;
KW Nucleotidyltransferase {ECO:0000313|EMBL:AMV40413.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000076365};
KW Transferase {ECO:0000313|EMBL:AMV40413.1}.
FT DOMAIN 29..148
FT /note="Response regulatory"
FT /evidence="ECO:0000259|PROSITE:PS50110"
FT DOMAIN 303..346
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT DOMAIN 380..434
FT /note="PAC"
FT /evidence="ECO:0000259|PROSITE:PS50113"
FT DOMAIN 469..600
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
SQ SEQUENCE 613 AA; 66793 MW; 6D004E995EB9F7BF CRC64;
MTVHRGAGRD DVASTPRQAF GIVPGEPAVV LVVDRDPARR SRAGVVIANQ LGRRVRYACG
PEEATAVVRG EDVAAVLAGL QTDDGVGLEL VRSLRRSRPE IPVVVIAGDE GDEKSEAEVA
EALRMGATDY VARDRLEAEL GPTLDRLRRL TSPVPPRGCE GLVRQESRFV VADDPEALAV
AIAAVREQFE VVGGWDPADS LRMAIALEEA LRAVVGPDRR AALTVVHEPD ASRFTLRKDG
EGAAPPPAAG PLAAEPSRRF STRALRLMRS FMDEVRFDRD GDGVTLVKRL ASRQGRPAGE
ATDHDSARRL IEAFPDAAYM VDATGRILYW NEAAVRFTGY SREEMIRPFA TVERIAFTDS
LGVPLSREKR PAACCLREGR SVELHLFFHH RDHRQLWVEV RGSLVRDNSG GVAGCLVVLR
DATSSIVVEQ ALRQARREAE SDPLTGLANR RTFDRLLDLH LRMQAREGRP FCLIMADIDH
FKSINDGWGH AVGDRALTAF ARMLQNQSRA EDVVVRFGGE EFVILLPDHS LDVAARIAER
LRAATPSSAP PELGDRRLTA SFGVAQALAG ESASELIRRA DAALYRAKDR GRDRVELDQV
GGAGEEPGAA GRG
//
