ID A0A147HCJ1_9BURK Unreviewed; 305 AA.
AC A0A147HCJ1;
DT 08-JUN-2016, integrated into UniProtKB/TrEMBL.
DT 08-JUN-2016, sequence version 1.
DT 27-MAR-2024, entry version 18.
DE RecName: Full=YicC family protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=NS331_00505 {ECO:0000313|EMBL:KTT27878.1};
OS Pseudacidovorax intermedius.
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Comamonadaceae; Pseudacidovorax.
OX NCBI_TaxID=433924 {ECO:0000313|EMBL:KTT27878.1, ECO:0000313|Proteomes:UP000072741};
RN [1] {ECO:0000313|EMBL:KTT27878.1, ECO:0000313|Proteomes:UP000072741}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NS331 {ECO:0000313|EMBL:KTT27878.1,
RC ECO:0000313|Proteomes:UP000072741};
RX PubMed=26793183;
RA Midha S., Bansal K., Sharma S., Kumar N., Patil P.P., Chaudhry V.,
RA Patil P.B.;
RT "Genomic Resource of Rice Seed Associated Bacteria.";
RL Front. Microbiol. 6:1551-1551(2016).
CC -!- COFACTOR:
CC Name=a divalent metal cation; Xref=ChEBI:CHEBI:60240;
CC Evidence={ECO:0000256|ARBA:ARBA00001968};
CC -!- SIMILARITY: Belongs to the YicC/YloC family.
CC {ECO:0000256|ARBA:ARBA00035648}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KTT27878.1}.
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DR EMBL; LDSL01000004; KTT27878.1; -; Genomic_DNA.
DR RefSeq; WP_058640066.1; NZ_LDSL01000004.1.
DR AlphaFoldDB; A0A147HCJ1; -.
DR PATRIC; fig|433924.3.peg.3132; -.
DR OrthoDB; 9771229at2; -.
DR Proteomes; UP000072741; Unassembled WGS sequence.
DR GO; GO:0004521; F:RNA endonuclease activity; IEA:InterPro.
DR InterPro; IPR013551; YicC-like_C.
DR InterPro; IPR013527; YicC-like_N.
DR InterPro; IPR005229; YicC/YloC-like.
DR NCBIfam; TIGR00255; YicC/YloC family endoribonuclease; 1.
DR PANTHER; PTHR30636; UNCHARACTERIZED; 1.
DR PANTHER; PTHR30636:SF3; UPF0701 PROTEIN YICC; 1.
DR Pfam; PF08340; DUF1732; 1.
DR Pfam; PF03755; YicC_N; 1.
PE 3: Inferred from homology;
KW Endonuclease {ECO:0000256|ARBA:ARBA00022759};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Reference proteome {ECO:0000313|Proteomes:UP000072741}.
FT DOMAIN 3..162
FT /note="Endoribonuclease YicC-like N-terminal"
FT /evidence="ECO:0000259|Pfam:PF03755"
FT DOMAIN 222..305
FT /note="Endoribonuclease YicC-like C-terminal"
FT /evidence="ECO:0000259|Pfam:PF08340"
SQ SEQUENCE 305 AA; 33321 MW; AD2F48737D33542F CRC64;
MAVYSMTGYA SGQSRASGAE GALGEERSGP RLGIEVRAVN SRFLDLSFKL ADELRQHEPL
LRELLTKRLK RGKVELRAAI DSGTDGGVTE PSVRLLQRLN GVQDAVRAWL PTARELSVAD
VLRLAGNDSG RHGATDGFDI GALAATVIDD LIAAREREGA RLVALLRDRL ESLQALAAQA
EPLVPQLVEQ QRARFLERWQ EAMGLAAGAA TPEAAQDRAL SEATAFAIRI DVAEELGRLR
AHLDEIERLL RQGGEVGKRL DFLIQELHRE ANTLGSKSAA LELTRIGVDM KVLIEQMREQ
VQNIE
//
