ID A0A150V2B6_9PEZI Unreviewed; 860 AA.
AC A0A150V2B6;
DT 08-JUN-2016, integrated into UniProtKB/TrEMBL.
DT 08-JUN-2016, sequence version 1.
DT 27-MAR-2024, entry version 24.
DE RecName: Full=Transcription factor BYE1 {ECO:0000256|ARBA:ARBA00021616};
GN ORFNames=M433DRAFT_135373 {ECO:0000313|EMBL:KYG44676.1};
OS Acidomyces richmondensis BFW.
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes;
OC Dothideomycetidae; Mycosphaerellales; Teratosphaeriaceae; Acidomyces.
OX NCBI_TaxID=766039 {ECO:0000313|EMBL:KYG44676.1, ECO:0000313|Proteomes:UP000075602};
RN [1] {ECO:0000313|EMBL:KYG44676.1, ECO:0000313|Proteomes:UP000075602}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BFW {ECO:0000313|EMBL:KYG44676.1,
RC ECO:0000313|Proteomes:UP000075602};
RX PubMed=26973616; DOI=10.3389/fmicb.2016.00238;
RA Mosier A.C., Miller C.S., Frischkorn K.R., Ohm R.A., Li Z., LaButti K.,
RA Lapidus A., Lipzen A., Chen C., Johnson J., Lindquist E.A., Pan C.,
RA Hettich R.L., Grigoriev I.V., Singer S.W., Banfield J.F.;
RT "Fungi Contribute Critical but Spatially Varying Roles in Nitrogen and
RT Carbon Cycling in Acid Mine Drainage.";
RL Front. Microbiol. 7:238-238(2016).
CC -!- FUNCTION: Negative regulator of transcription elongation.
CC {ECO:0000256|ARBA:ARBA00002311}.
CC -!- SIMILARITY: Belongs to the BYE1 family.
CC {ECO:0000256|ARBA:ARBA00011050}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KYG44676.1}.
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DR EMBL; JPDO01000212; KYG44676.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A150V2B6; -.
DR STRING; 766039.A0A150V2B6; -.
DR Proteomes; UP000075602; Unassembled WGS sequence.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR CDD; cd21538; SPOC_TFIIS; 1.
DR Gene3D; 1.10.472.30; Transcription elongation factor S-II, central domain; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR012921; SPOC_C.
DR InterPro; IPR003618; TFIIS_cen_dom.
DR InterPro; IPR036575; TFIIS_cen_dom_sf.
DR InterPro; IPR019786; Zinc_finger_PHD-type_CS.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR11477:SF20; PROTEIN PARTNER OF SNF, ISOFORM B; 1.
DR PANTHER; PTHR11477; TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF20826; PHD_5; 1.
DR Pfam; PF07744; SPOC; 1.
DR Pfam; PF07500; TFIIS_M; 1.
DR SMART; SM00249; PHD; 1.
DR SMART; SM00510; TFS2M; 1.
DR SUPFAM; SSF46942; Elongation factor TFIIS domain 2; 1.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 1.
DR PROSITE; PS51321; TFIIS_CENTRAL; 1.
DR PROSITE; PS01359; ZF_PHD_1; 1.
PE 3: Inferred from homology;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000075602};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771}.
FT DOMAIN 238..364
FT /note="TFIIS central"
FT /evidence="ECO:0000259|PROSITE:PS51321"
FT REGION 1..57
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 132..228
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 380..498
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 690..797
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 38..57
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 143..196
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 410..425
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 445..468
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 720..747
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 748..768
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 780..794
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 860 AA; 94960 MW; D42CFA1A9F65EF25 CRC64;
MSEEPRRSGR ATKGQHTKAS SSPAPNPKPA KGASKAKSKK ITKLEAAEDD SGEDDKIRCI
CGNDDANDKR AFIGCEACLV WQHNVCMGEP EDEEDVPDHY FCEECRPEEH AETLSALSKG
EKIWETRNQQ WKAWKKMSAQ RRKSKGKGED TAPPWLKKGG EEKADKETHL ENQETNGKRK
REFVVANVEP AERPPEVEEQ AAASTRPDKR RKSSQPPGNE APNDADTAIV DIDKLPADRK
KIAEVLSKII TDDVQSRTKS GFRIPDGHTA KSLGERYGGL IEYACFMNYG DAKDEKYKQQ
FRTLNANLKR NRLLIERLLT GSLTADELSL MESKDMLSEE KQREQAKLKE ELDRQAIAVE
EDGPIYRQSH KGYEKIEDET HRASEFASNP APVRDRPGVA DEGSARSPTA DETAKVSSPQ
TAKAPETKRP SLPAAGERRR SSQHNFDMNA IWNRTAHSPT SSTANPLRPM QVPPRRRSSV
AHPLPSASMT DGEKHDPDVD RMLQDDDEEY SPSEVIGDDT IVWRGKLAHE SIGDPLVNAR
FVAGRDLTST ANWRDILPSA LNIDGRLQIA KAEEYLCGLQ WSHNSDVAVL ALTPYDDAAT
FNRVFDYFSS RQRYAVINKD KPPMVKDLYV IPVEVRSNLP EHIQMLEHCT IKTPVEERLL
LATCVVSRAP LPPPPPTSTQ QLQLQQNGHH INGTQQPANG TGGAQPAGLP QHMRPDGQGP
SGSPLNSQAP TFSPGQAGGS QPQPATGYSA PPQQPPHAVP PVVFQPNPYG PQQSPFNSHT
PAAYPPPQPH HAAPLHGPPL LTNPLIAEIL GPFEYCPTAQ QVIAAQPGIE RAKLENLRKI
FEEDVQAREN INALAAKLQI
//
