ID A0A151M9V1_ALLMI Unreviewed; 2381 AA.
AC A0A151M9V1;
DT 08-JUN-2016, integrated into UniProtKB/TrEMBL.
DT 08-JUN-2016, sequence version 1.
DT 27-MAR-2024, entry version 27.
DE SubName: Full=Chondroitin sulfate proteoglycan 4-like {ECO:0000313|EMBL:KYO21297.1};
GN Name=FREM3-2 {ECO:0000313|EMBL:KYO21297.1};
GN ORFNames=Y1Q_0001545 {ECO:0000313|EMBL:KYO21297.1};
OS Alligator mississippiensis (American alligator).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae;
OC Alligator.
OX NCBI_TaxID=8496 {ECO:0000313|EMBL:KYO21297.1};
RN [1] {ECO:0000313|EMBL:KYO21297.1, ECO:0000313|Proteomes:UP000050525}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=KSC_2009_1 {ECO:0000313|EMBL:KYO21297.1};
RX PubMed=22293439; DOI=10.1186/gb-2012-13-1-415;
RA St John J.A., Braun E.L., Isberg S.R., Miles L.G., Chong A.Y., Gongora J.,
RA Dalzell P., Moran C., Bed'hom B., Abzhanov A., Burgess S.C., Cooksey A.M.,
RA Castoe T.A., Crawford N.G., Densmore L.D., Drew J.C., Edwards S.V.,
RA Faircloth B.C., Fujita M.K., Greenwold M.J., Hoffmann F.G., Howard J.M.,
RA Iguchi T., Janes D.E., Khan S.Y., Kohno S., de Koning A.J., Lance S.L.,
RA McCarthy F.M., McCormack J.E., Merchant M.E., Peterson D.G., Pollock D.D.,
RA Pourmand N., Raney B.J., Roessler K.A., Sanford J.R., Sawyer R.H.,
RA Schmidt C.J., Triplett E.W., Tuberville T.D., Venegas-Anaya M.,
RA Howard J.T., Jarvis E.D., Guillette L.J.Jr., Glenn T.C., Green R.E.,
RA Ray D.A.;
RT "Sequencing three crocodilian genomes to illuminate the evolution of
RT archosaurs and amniotes.";
RL Genome Biol. 13:415-415(2012).
CC -!- CAUTION: Lacks conserved residue(s) required for the propagation of
CC feature annotation. {ECO:0000256|PROSITE-ProRule:PRU00122}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KYO21297.1}.
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DR EMBL; AKHW03006295; KYO21297.1; -; Genomic_DNA.
DR RefSeq; XP_006268830.2; XM_006268768.3.
DR STRING; 8496.A0A151M9V1; -.
DR GeneID; 102562253; -.
DR KEGG; amj:102562253; -.
DR CTD; 1464; -.
DR eggNOG; KOG3597; Eukaryota.
DR OrthoDB; 4072625at2759; -.
DR Proteomes; UP000050525; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR CDD; cd00110; LamG; 2.
DR Gene3D; 2.60.120.200; -; 2.
DR InterPro; IPR013320; ConA-like_dom_sf.
DR InterPro; IPR039005; CSPG_rpt.
DR InterPro; IPR001791; Laminin_G.
DR PANTHER; PTHR45739:SF12; CHONDROITIN SULFATE PROTEOGLYCAN 4-LIKE ISOFORM X2; 1.
DR PANTHER; PTHR45739; MATRIX PROTEIN, PUTATIVE-RELATED; 1.
DR Pfam; PF16184; Cadherin_3; 13.
DR Pfam; PF02210; Laminin_G_2; 2.
DR SMART; SM00282; LamG; 2.
DR SUPFAM; SSF49899; Concanavalin A-like lectins/glucanases; 2.
DR PROSITE; PS51854; CSPG; 13.
DR PROSITE; PS50025; LAM_G_DOMAIN; 2.
PE 4: Predicted;
KW Glycoprotein {ECO:0000256|ARBA:ARBA00023180};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000050525};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Signal {ECO:0000256|ARBA:ARBA00022729, ECO:0000256|SAM:SignalP};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT SIGNAL 1..26
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 27..2381
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5007584884"
FT TRANSMEM 2271..2295
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 29..204
FT /note="Laminin G"
FT /evidence="ECO:0000259|PROSITE:PS50025"
FT DOMAIN 214..393
FT /note="Laminin G"
FT /evidence="ECO:0000259|PROSITE:PS50025"
FT REPEAT 444..539
FT /note="CSPG"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU01201"
FT REPEAT 569..663
FT /note="CSPG"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU01201"
FT REPEAT 680..779
FT /note="CSPG"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU01201"
FT REPEAT 798..893
FT /note="CSPG"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU01201"
FT REPEAT 913..1007
FT /note="CSPG"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU01201"
FT REPEAT 1036..1128
FT /note="CSPG"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU01201"
FT REPEAT 1144..1234
FT /note="CSPG"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU01201"
FT REPEAT 1256..1355
FT /note="CSPG"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU01201"
FT REPEAT 1372..1466
FT /note="CSPG"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU01201"
FT REPEAT 1490..1580
FT /note="CSPG"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU01201"
FT REPEAT 1598..1696
FT /note="CSPG"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU01201"
FT REPEAT 1721..1820
FT /note="CSPG"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU01201"
FT REPEAT 1855..1948
FT /note="CSPG"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU01201"
FT REGION 2208..2254
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 2381 AA; 264934 MW; B3E6E2970BCCDB0A CRC64;
MGSSTLSPAL LLPLLQFGFQ MLALHADPEP GASFFGDSFV EVPSVDAYST VHLRLQFYTS
QHKGLLFLAA GQADYLLMEL QSGILQVRLQ LGSEKIMVNS PAGLQLNNLV IHSAELLVSD
GQMTLIVDGL FNTSVEIRGL LQLLDIQYGL YIGGAGTLEL PYLSRSTSPF RGCLHTVIFN
GLDVLSLLTS GDGSKIFHRV QEGCSTEFSA GPDDPFSFLG PHSYITFPGW SAREEGTIEF
VITTSITQAP LIYQSGLNND FIYLEIFDGR LRGVVEKGNG TVILHNNFYI SDDQQHYVKV
YVDMYKFEIL VDYYGSRTSN RGIHSHLDLQ GSLFIGGVNE KALHRLREYR LAFISGDSSV
NRSFIGCLED LRINLEKKSL QDALVTKGIT TVCGKQEQYW DYENVYEQDE ATTTPVPDVW
HEVLGPVVEP CHPDPSLPPI FANLTRLLHV SPLIVAEGGT AFLEWRHTQP TIDLNSASIR
QSQVLFSVTN DPRHGQLELD IPSSRNRRKF TLLDVVNRKV KYVHDGSESP MDQLMLEVTV
TARRGVPDCL RQGQIYLLPV MINPINDAPQ VIFPHGDLMV ILERTRKHLG MDIIQAHDDD
TSCDNLKFQL LGSKRMEEGY VEYDFQPGVP IDEFSCRDLE AGNVVYVHQS GPSLQLIFQV
SDGMVRSPVA ALRVIAIEPD IQVHNNTGLF ISQGGTVLIT TANLSVETNA VKQRVTIIYR
LTDPLWYGEI QKQGSMGGEW KKVEAFHQQD IEHGRVQYFS TDPEHHLEDV MEKLRFEVQV
GQKVLTNNTF LIRIKRATIK MRTMVPLLMK NKRHKNITTR ELEATLEDPN ATPLSFYYEI
IQAPKKGNLE LLGSRLTEGF GFTQEALQRR QLSYSATVRN AKETEDSFQF RVTAGDQYSP
VYTYMISIGG DPDAPALTNV LLSVLEGGQA VISKDHLFVQ SLSSMDYMYE VIEGPAHGKL
IWRTSPNWPA NEEVITEFTN EDILHRRLLY QHDDSETTED DIPFVAIQQD EGSTDPEAEE
VRGVFRISIQ PVNDHAPTQV VNKVFNVVRN GQRLLTTDDI AFVDEDSGFS DAQLVLVRKD
ILFGSIHSIE DRSRQVYRFT QEDLRKKKIL FVHSGADRGW IQLQVSDGLH QTTAVLEVQA
SDPYIQIVNN TGLVIHQGSH GTIDSSVLSL ETNMDIRNDE DIRFLITTPP RWGMVLRGGQ
PTGIFSQRDL MNGEIVYHHN GSRNSRDEFQ FSVEANQVAV EDTLEVTVFL DNHPSPLTVI
HHKRIYVFEG EAVEIKKDQL LVTHEEIPPH EIIYSVSSDP HSGFLVMVYH DSDSDEPPSL
DPVHSFTQED INEGKVLYLH SKPEEQTDQF TVDIMASRAD ALEGIVVNLD VLPIAVPLEV
HNVTIMGGGS TVLSTDILTI PRAYITVLSV EFVILEPPKY GTIQNIDRPE EGNLHFFSWN
EVEQQLIQYT HDGSKALADS FTILANASEV DRQSQPKTIS ITIVPRIDKG PVVTINAGLQ
MQEGTTAEIT PDILRSEDEG SSPEDVVYSI MSPTNGKIVL KSFPSNGILQ FTQAQINSGL
IQFVHNGSLD GGFSFDLSDG KNVSPRHFFS VSAHQELVIS LVNKQDLTVC PGTLQPITSQ
NLKAMTSSKA NASSLFYSIQ QPPQLGRLVN SQLGSAMGDV KNFTQAEVNS GTIFYQHEMP
QQPFWLTQDA LHFRVSSPSI VTEPYILRVS ISFEASCPQQ STQLWRNKGL IVQKAQHAKI
NTSVLDASNL LTKVPESKRT SYDVVFLVTE LPSHGHLSVA DVPINKEHPY FLQSDLVMGG
LNYAHYEAGA IEDHFRFKAW LRPLAMESIY PPQEGGGVFI SEAFNITVNP NNENPPQLTK
QRHVLQAHQG SLVMLSRDHL DVVDPDSSPE EIEYKILKRP ASGFLAIMHN KQVPISQFTQ
AEVNAGHLVF IANGSSSLGS LDLSISDGHN LPIFTSLEVE VLPVLTTGMS QIPLEIPQDR
NIAYLSRDHL LGGSQPEEQD VLYTITRNPT FGQLRVNQKP ARDFSQKQVD QGEVTFIFTD
FTSPEDEFQF LSRSKGGNMS GAVNVTVKAL VRMQQGILWP RGKTILLDTS VLDASELANK
TKSVPVFKIH RAPQGSHFVK VSDDKDRQPT PTDTFTQDDL ERGLIALEVP QAKDSGQHLQ
NNSFVFELAA AGVPPALELL KYSSEPFDSS KVYRATLLTA THFPDTSLWP TLQETSPSPA
TSATQPQGLP RPSHNTSEHE TPPTTWQSHE ATTSPSPVEG GTFLSFIEAN MFSVIIPICL
IILLLALILP LLFYLHKRNK TGKHNVQGTA AKPKNGAVVD QETFRKTDPN QAIPLTTVNT
LEAKGSGPVT KGAGAGGQQD PELLQYCRTS NPTLKNNQYW V
//
