ID A0A151QT98_CAJCA Unreviewed; 570 AA.
AC A0A151QT98;
DT 08-JUN-2016, integrated into UniProtKB/TrEMBL.
DT 08-JUN-2016, sequence version 1.
DT 27-MAR-2024, entry version 24.
DE SubName: Full=Retrovirus-related Pol polyprotein from transposon 297 family {ECO:0000313|EMBL:KYP33541.1};
GN ORFNames=KK1_045594 {ECO:0000313|EMBL:KYP33541.1};
OS Cajanus cajan (Pigeon pea) (Cajanus indicus).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Cajanus.
OX NCBI_TaxID=3821 {ECO:0000313|EMBL:KYP33541.1, ECO:0000313|Proteomes:UP000075243};
RN [1] {ECO:0000313|EMBL:KYP33541.1, ECO:0000313|Proteomes:UP000075243}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Asha {ECO:0000313|Proteomes:UP000075243};
RX PubMed=22057054; DOI=10.1038/nbt.2022;
RA Varshney R.K., Chen W., Li Y., Bharti A.K., Saxena R.K., Schlueter J.A.,
RA Donoghue M.T., Azam S., Fan G., Whaley A.M., Farmer A.D., Sheridan J.,
RA Iwata A., Tuteja R., Penmetsa R.V., Wu W., Upadhyaya H.D., Yang S.P.,
RA Shah T., Saxena K.B., Michael T., McCombie W.R., Yang B., Zhang G.,
RA Yang H., Wang J., Spillane C., Cook D.R., May G.D., Xu X., Jackson S.A.;
RT "Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop
RT of resource-poor farmers.";
RL Nat. Biotechnol. 30:83-89(2012).
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DR EMBL; KQ484849; KYP33541.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A151QT98; -.
DR OMA; VEWSITH; -.
DR Proteomes; UP000075243; Unassembled WGS sequence.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0004523; F:RNA-DNA hybrid ribonuclease activity; IEA:InterPro.
DR CDD; cd09279; RNase_HI_like; 1.
DR CDD; cd01647; RT_LTR; 1.
DR Gene3D; 1.10.340.70; -; 1.
DR Gene3D; 3.30.70.270; -; 2.
DR Gene3D; 3.10.10.10; HIV Type 1 Reverse Transcriptase, subunit A, domain 1; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR041588; Integrase_H2C2.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR002156; RNaseH_domain.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR000477; RT_dom.
DR InterPro; IPR041373; RT_RNaseH.
DR PANTHER; PTHR37984:SF7; INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR37984; PROTEIN CBG26694; 1.
DR Pfam; PF17921; Integrase_H2C2; 1.
DR Pfam; PF17917; RT_RNaseH; 1.
DR Pfam; PF00078; RVT_1; 1.
DR Pfam; PF13456; RVT_3; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50879; RNASE_H_1; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000075243}.
FT DOMAIN 312..449
FT /note="RNase H type-1"
FT /evidence="ECO:0000259|PROSITE:PS50879"
SQ SEQUENCE 570 AA; 64430 MW; 83B36E3D93BDFBBD CRC64;
MPGIDADFIC HRLAIHKEAK LVTQRKKKVG GERREAIITE TQKLLNAGFI REVRYTTWLA
NVVLVKKNSG KWRMCVDYTD LNKACPKDSY PLPSIDRLDD EASGHALLSA TYQRLMDKVF
HQQIGRNMEV YINDMVVKTT SATDHAADLP EVFAQVRKHN MHLNPEKCVF GVQGGKFLGF
MITSRGIEAN PEKCQAIIQM QSPQMVKEVQ RLAGRLVSLS HAEKRYQMIE KLALALVTAA
RHLRPYFQSY QVVVKTDYPI KQILRKPELV GRMIAWSVEL SEFGIQYESR GPLKAQCLAD
FVAELTPTST KEPQVWTLHV DGSSNSKGGG AGIILEGPNQ VTLEQSLKFD FKVTNNQAEY
KALLAGLRLA RDLGARKVSC NSDSKLMISS FDEFTIKHVP REQNARTDLL SKLASTKRPG
QHRTIIQETL HSPSLDDKIV NVSDNEDLGW MAGIWGYLKE GTLPEDKDEA RKIRMRSAKF
IIIGDELFKR GVSSPLLKCL TASQVAYVIR EIHQGICGMH SEARSMETRV LPARYYWPTL
KSDCQSHIQK CKECQQFSNA HDNRPKLFTT
//
