ID A0A151RUD9_CAJCA Unreviewed; 543 AA.
AC A0A151RUD9;
DT 08-JUN-2016, integrated into UniProtKB/TrEMBL.
DT 08-JUN-2016, sequence version 1.
DT 27-MAR-2024, entry version 22.
DE SubName: Full=Retrovirus-related Pol polyprotein from transposon opus {ECO:0000313|EMBL:KYP46166.1};
GN ORFNames=KK1_032270 {ECO:0000313|EMBL:KYP46166.1};
OS Cajanus cajan (Pigeon pea) (Cajanus indicus).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Cajanus.
OX NCBI_TaxID=3821 {ECO:0000313|EMBL:KYP46166.1, ECO:0000313|Proteomes:UP000075243};
RN [1] {ECO:0000313|EMBL:KYP46166.1, ECO:0000313|Proteomes:UP000075243}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Asha {ECO:0000313|Proteomes:UP000075243};
RX PubMed=22057054; DOI=10.1038/nbt.2022;
RA Varshney R.K., Chen W., Li Y., Bharti A.K., Saxena R.K., Schlueter J.A.,
RA Donoghue M.T., Azam S., Fan G., Whaley A.M., Farmer A.D., Sheridan J.,
RA Iwata A., Tuteja R., Penmetsa R.V., Wu W., Upadhyaya H.D., Yang S.P.,
RA Shah T., Saxena K.B., Michael T., McCombie W.R., Yang B., Zhang G.,
RA Yang H., Wang J., Spillane C., Cook D.R., May G.D., Xu X., Jackson S.A.;
RT "Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop
RT of resource-poor farmers.";
RL Nat. Biotechnol. 30:83-89(2012).
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DR EMBL; KQ483567; KYP46166.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A151RUD9; -.
DR Proteomes; UP000075243; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0004523; F:RNA-DNA hybrid ribonuclease activity; IEA:InterPro.
DR CDD; cd09279; RNase_HI_like; 1.
DR Gene3D; 1.10.340.70; -; 1.
DR Gene3D; 3.30.70.270; -; 2.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR041588; Integrase_H2C2.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR002156; RNaseH_domain.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR041577; RT_RNaseH_2.
DR PANTHER; PTHR37984:SF7; INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR37984; PROTEIN CBG26694; 1.
DR Pfam; PF17921; Integrase_H2C2; 1.
DR Pfam; PF17919; RT_RNaseH_2; 1.
DR Pfam; PF13456; RVT_3; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50879; RNASE_H_1; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000075243}.
FT DOMAIN 254..387
FT /note="RNase H type-1"
FT /evidence="ECO:0000259|PROSITE:PS50879"
SQ SEQUENCE 543 AA; 62218 MW; C5C4D63BBB6A481F CRC64;
MRKHGLKMNP LKCAFGVTAG EFLGFVIHQK GIEVDRNKTK AIMETKPPSN KKELQSLLGE
VNFLRRFISN FSGKIKVFSP LLHLKKEQEF RWNEEHQKAF DEIKAYLVHP PVLAPLSKGK
QLKLYISAND STIAGMLAQD DDNGIERIIY YLSRMLVGAE ISYTHLEKLC LSLYVACTKL
KYYLRPCDVV IFCRSNVIKY MLCKLVLHSR IGKWALALTE YSLTFEPLKA IKGQVIADFL
ADHSKETKEI NYLTTKAWEL FFDGSKHELG TGIGLLIISP EGIPTRISLK IDKGYWNNET
EYQALITGLK ILKELGAKNV VIRGDSQLVI KQLTQEYKCL NEKLVEFKTR AVQLLNTFDE
VELQHVSRHA NTIASELAQM ASGYKVSKKC FESLIHMQNE LVCQLETLSV SSSNQQDWKR
KLIEYLQNPN IKVERKIKLQ ALNYVLLNNE LYKRGFDGVL FKCLGSHEGY IAMAEVHEGI
FGVHQAGEKM KWTLSRKGFY WPTMIKDCIE FAKSYEECQK HGPIQRVPAS ELHSIIKPWP
FRG
//
