ID A0A151RX99_CAJCA Unreviewed; 995 AA.
AC A0A151RX99;
DT 08-JUN-2016, integrated into UniProtKB/TrEMBL.
DT 08-JUN-2016, sequence version 1.
DT 27-MAR-2024, entry version 20.
DE RecName: Full=RNA-directed DNA polymerase {ECO:0000256|ARBA:ARBA00012493};
DE EC=2.7.7.49 {ECO:0000256|ARBA:ARBA00012493};
GN ORFNames=KK1_031206 {ECO:0000313|EMBL:KYP47179.1};
OS Cajanus cajan (Pigeon pea) (Cajanus indicus).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Cajanus.
OX NCBI_TaxID=3821 {ECO:0000313|EMBL:KYP47179.1, ECO:0000313|Proteomes:UP000075243};
RN [1] {ECO:0000313|EMBL:KYP47179.1, ECO:0000313|Proteomes:UP000075243}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Asha {ECO:0000313|Proteomes:UP000075243};
RX PubMed=22057054; DOI=10.1038/nbt.2022;
RA Varshney R.K., Chen W., Li Y., Bharti A.K., Saxena R.K., Schlueter J.A.,
RA Donoghue M.T., Azam S., Fan G., Whaley A.M., Farmer A.D., Sheridan J.,
RA Iwata A., Tuteja R., Penmetsa R.V., Wu W., Upadhyaya H.D., Yang S.P.,
RA Shah T., Saxena K.B., Michael T., McCombie W.R., Yang B., Zhang G.,
RA Yang H., Wang J., Spillane C., Cook D.R., May G.D., Xu X., Jackson S.A.;
RT "Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop
RT of resource-poor farmers.";
RL Nat. Biotechnol. 30:83-89(2012).
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DR EMBL; KQ483535; KYP47179.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A151RX99; -.
DR OMA; FMENCIE; -.
DR Proteomes; UP000075243; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR CDD; cd00303; retropepsin_like; 1.
DR CDD; cd09274; RNase_HI_RT_Ty3; 1.
DR CDD; cd01647; RT_LTR; 1.
DR Gene3D; 1.10.340.70; -; 1.
DR Gene3D; 3.30.70.270; -; 2.
DR Gene3D; 2.40.70.10; Acid Proteases; 1.
DR Gene3D; 3.10.10.10; HIV Type 1 Reverse Transcriptase, subunit A, domain 1; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR041588; Integrase_H2C2.
DR InterPro; IPR021109; Peptidase_aspartic_dom_sf.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR000477; RT_dom.
DR InterPro; IPR041373; RT_RNaseH.
DR PANTHER; PTHR37984:SF7; INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR37984; PROTEIN CBG26694; 1.
DR Pfam; PF17921; Integrase_H2C2; 1.
DR Pfam; PF17917; RT_RNaseH; 1.
DR Pfam; PF00665; rve; 1.
DR Pfam; PF00078; RVT_1; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50994; INTEGRASE; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000075243};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 887..907
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 869..995
FT /note="Integrase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50994"
SQ SEQUENCE 995 AA; 113735 MW; C2A42D2DE1DF6055 CRC64;
MGVVIQLANR NVTHPTGFVE DVLVRVGELI FPTDFNVLDM EDGFSHGSAP IILGRPFLKT
ARTKIDVYAS PLSMEFGDIV VHFNILDAMK FPSWVYTSEA HSIFHAELID DLGDEHIRDF
DSSHAKKHSF SFDLYSSFPC IESKSESEYQ SKCETNYEAS EFNTLGVVPL ALDFIQSECT
NYVAGSIKES DLQVKVQAAE PLFPSLVSSD VQPTPTPELK PLPGNLKFAY LEDDEKLTVI
ISTSLDVVQE EKLLQVLKKH KKASGWTLAD IPGISPSTCM HRILLEDGAK PVRQPLRRLN
LVILEVVKKE VTKLLQARII YPISDSQWVS LTVVKNERDE LIPTRVQNCW RVCIDYWKLN
QATRKDHFPL PFIDQMLERL VGKSHYCFLD GFSGYFQIHI APEDQEKTTF TCPFGTFAYR
RMPFGLCNAP GTFQRCMLNI FSDFMENCIE VFMDDFTIYG SSFDACLDSL DRVLNRCIET
NLVLNFEKCH FMVEQGIVLG NIISSRGIEV DPTKISVIAQ LPYPSCMREV RSFLGHAGFH
RRFIKDSSKK ALPLSSLLQK DIEFDFDDRC KEAFDCLKTA LTTTLIIQEP DWTVPFELMC
DASNYALGVV LAQRVDKSPR VIYYASRTLD AAQANYKTTE KELFAIIFAL DKFRSYLLCS
RVVIFTDHAS LKYLLKKADS KHRLIRWMFW LQEFDLDIRD RSGAQNLVAD HLSRIERAKN
SVDVLPIHDN FPDENLLIVS SVSVPSPTPW FANIVNYLVT FVYPPLASRA QIDKLKSDAK
HYVWDDPYLW KFCSDQVIRS CLPDHEIDFV LQFCHSSASG GHLGIQRTAR KVLDCGFYWP
TIFKDAWKIC STCEQCQRAG GALSWRQQMP QQPMLFYEVF DVWGIDFMGP FLVSFAFSYI
LLVVDYVSKW VEAKPTRTNN ARVIVDFFRS NIFCMFGVPR AIVSDHGTHF CNKSMQALLK
KYGVVHKIST PYHPQTNGQA EISYREIKRI LEKIV
//
