ID A0A151S1X6_CAJCA Unreviewed; 767 AA.
AC A0A151S1X6;
DT 08-JUN-2016, integrated into UniProtKB/TrEMBL.
DT 08-JUN-2016, sequence version 1.
DT 27-MAR-2024, entry version 27.
DE SubName: Full=Transposon Ty3-G Gag-Pol polyprotein {ECO:0000313|EMBL:KYP48747.1};
GN ORFNames=KK1_029549 {ECO:0000313|EMBL:KYP48747.1};
OS Cajanus cajan (Pigeon pea) (Cajanus indicus).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Cajanus.
OX NCBI_TaxID=3821 {ECO:0000313|EMBL:KYP48747.1, ECO:0000313|Proteomes:UP000075243};
RN [1] {ECO:0000313|EMBL:KYP48747.1, ECO:0000313|Proteomes:UP000075243}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Asha {ECO:0000313|Proteomes:UP000075243};
RX PubMed=22057054; DOI=10.1038/nbt.2022;
RA Varshney R.K., Chen W., Li Y., Bharti A.K., Saxena R.K., Schlueter J.A.,
RA Donoghue M.T., Azam S., Fan G., Whaley A.M., Farmer A.D., Sheridan J.,
RA Iwata A., Tuteja R., Penmetsa R.V., Wu W., Upadhyaya H.D., Yang S.P.,
RA Shah T., Saxena K.B., Michael T., McCombie W.R., Yang B., Zhang G.,
RA Yang H., Wang J., Spillane C., Cook D.R., May G.D., Xu X., Jackson S.A.;
RT "Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop
RT of resource-poor farmers.";
RL Nat. Biotechnol. 30:83-89(2012).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; KQ483492; KYP48747.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A151S1X6; -.
DR OMA; STHAIEM; -.
DR Proteomes; UP000075243; Unassembled WGS sequence.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0004523; F:RNA-DNA hybrid ribonuclease activity; IEA:InterPro.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR CDD; cd00303; retropepsin_like; 1.
DR CDD; cd09279; RNase_HI_like; 1.
DR CDD; cd01647; RT_LTR; 1.
DR Gene3D; 1.10.340.70; -; 1.
DR Gene3D; 3.30.70.270; -; 2.
DR Gene3D; 2.40.70.10; Acid Proteases; 1.
DR Gene3D; 3.10.10.10; HIV Type 1 Reverse Transcriptase, subunit A, domain 1; 2.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR041588; Integrase_H2C2.
DR InterPro; IPR021109; Peptidase_aspartic_dom_sf.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR002156; RNaseH_domain.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR000477; RT_dom.
DR PANTHER; PTHR24559:SF437; RIBONUCLEASE H; 1.
DR PANTHER; PTHR24559; TRANSPOSON TY3-I GAG-POL POLYPROTEIN; 1.
DR Pfam; PF17921; Integrase_H2C2; 1.
DR Pfam; PF00078; RVT_1; 1.
DR Pfam; PF13456; RVT_3; 1.
DR SUPFAM; SSF50630; Acid proteases; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR PROSITE; PS50879; RNASE_H_1; 1.
DR PROSITE; PS50878; RT_POL; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW DNA recombination {ECO:0000256|ARBA:ARBA00023172};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000075243}.
FT DOMAIN 283..486
FT /note="Reverse transcriptase"
FT /evidence="ECO:0000259|PROSITE:PS50878"
FT DOMAIN 512..645
FT /note="RNase H type-1"
FT /evidence="ECO:0000259|PROSITE:PS50879"
FT REGION 185..206
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 581..608
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 767 AA; 87734 MW; DCC984FCCC8E1CE6 CRC64;
MKGHLKPLLL TLMIEGHEVN KVLVDGGAAV NILPRTMLKR FGKSTADLKP HNILISDYAG
KSSHPEGMIL LDVQIGSVKR TTMFIVTPSK ANFNVLLGRE WIHGVGVVPS TIHQKIFFWN
DDEGLEVLDA DQKAYEVGMY FADQQLTAFA KTKPFDAYNA GVMDEEEGVK KIFCWDVNKG
VAKKKENQKT KKDRMDQEIE TSKEDKKQES EFKLDCIFDD SPLGFERATN EEHKLESQDP
LEEINLGSVE NRKVTYDSKL SQGELKEELI RVLHEYKDCF AWDYDEMPRL GRGLVEHRLP
MIPGKKPVKQ SPRRFAPEII EKIKEEIERL LKAKFIRTSR YAEWISNVVP VIKKNGKLRV
CIDFRDLNTA TPKDEYPMPI AETMIDVAAG NEIMSALGVY EWVMMPFGLK NAGATYQREM
NLIFHDLIGK FVQVYIDDII VGSKQKEDHL CHLKLSFERM RKHGLKMNPL KCAFGITAEE
FLGFVIHQKL KCFLLYFLAD HSKETEEVDY LTTKPWELFF DGSKHELGTG IGLLIISPEG
IPTKLSFKTN RGYSNNETEY QALITGLEIL KELGAKNVVI REDSQLVIKQ LTQEYKCLNE
KLIEFKTRAV QLLNAFDAVE LQYVSRHANT IANELAQVTS GIKLQALNYV MLNNELYKKG
FDGILFKCLG NHESYIAMVE VHEGICGAHQ AGEKMKWTLS RKGFYWPTMI KNCIEFAKSC
EECQRHGPIQ RVPTSELHSI IKPWPFRGWA IDVIGQIHLR NSSNNYH
//
