ID A0A151T8K0_CAJCA Unreviewed; 1040 AA.
AC A0A151T8K0;
DT 08-JUN-2016, integrated into UniProtKB/TrEMBL.
DT 08-JUN-2016, sequence version 1.
DT 27-MAR-2024, entry version 22.
DE SubName: Full=Retrovirus-related Pol polyprotein from transposon TNT 1-94 {ECO:0000313|EMBL:KYP63355.1};
GN ORFNames=KK1_017925 {ECO:0000313|EMBL:KYP63355.1};
OS Cajanus cajan (Pigeon pea) (Cajanus indicus).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Cajanus.
OX NCBI_TaxID=3821 {ECO:0000313|EMBL:KYP63355.1, ECO:0000313|Proteomes:UP000075243};
RN [1] {ECO:0000313|EMBL:KYP63355.1, ECO:0000313|Proteomes:UP000075243}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Asha {ECO:0000313|Proteomes:UP000075243};
RX PubMed=22057054; DOI=10.1038/nbt.2022;
RA Varshney R.K., Chen W., Li Y., Bharti A.K., Saxena R.K., Schlueter J.A.,
RA Donoghue M.T., Azam S., Fan G., Whaley A.M., Farmer A.D., Sheridan J.,
RA Iwata A., Tuteja R., Penmetsa R.V., Wu W., Upadhyaya H.D., Yang S.P.,
RA Shah T., Saxena K.B., Michael T., McCombie W.R., Yang B., Zhang G.,
RA Yang H., Wang J., Spillane C., Cook D.R., May G.D., Xu X., Jackson S.A.;
RT "Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop
RT of resource-poor farmers.";
RL Nat. Biotechnol. 30:83-89(2012).
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DR EMBL; CM003609; KYP63355.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A151T8K0; -.
DR Proteomes; UP000075243; Chromosome 7.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR CDD; cd01647; RT_LTR; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 3.10.10.10; HIV Type 1 Reverse Transcriptase, subunit A, domain 1; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR025724; GAG-pre-integrase_dom.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR000477; RT_dom.
DR InterPro; IPR013103; RVT_2.
DR InterPro; IPR001878; Znf_CCHC.
DR InterPro; IPR036875; Znf_CCHC_sf.
DR PANTHER; PTHR42648:SF18; INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR42648; TRANSPOSASE, PUTATIVE-RELATED; 1.
DR Pfam; PF13976; gag_pre-integrs; 1.
DR Pfam; PF14223; Retrotran_gag_2; 1.
DR Pfam; PF00665; rve; 1.
DR Pfam; PF00078; RVT_1; 1.
DR Pfam; PF07727; RVT_2; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 2.
DR SUPFAM; SSF57756; Retrovirus zinc finger-like domains; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50994; INTEGRASE; 1.
DR PROSITE; PS50158; ZF_CCHC; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Reference proteome {ECO:0000313|Proteomes:UP000075243};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00047}.
FT DOMAIN 144..159
FT /note="CCHC-type"
FT /evidence="ECO:0000259|PROSITE:PS50158"
FT DOMAIN 373..544
FT /note="Integrase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50994"
FT REGION 85..140
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1040 AA; 116534 MW; 2528AD277DE3D543 CRC64;
MHRGSISVIE YGKKFRTICD QLAAIGAPIA NDDKVHWFLR GLGPSYANFS TGQLDQVPSP
RFTDILCKVE SHAIFQASLE EPTPSQPAAF YVNNQPRSSG NQSSRSGNRG HSNDGSNGGN
RGNSNGGSRQ RRNNSGRRNS YVPRCQICRE QGHYANKCPV RWDRSSESAN LAQAFAASCS
VDTSNQSDWY MDTGATSHMT PSSSQLTDSQ NYNGTDHVFV GNETSLNITH VGSRSLSHTV
PLSDVLVVPN LTKNLVSVNK LTRDNHAKAI FVDDSFVIQN RKTGRVLARG RCDQGLYVMD
QGPQALLTTS SSLPRACFEL WHSSLGRVNF DVINKLNQQG YLNVSSILPN PIYCTTCQMA
KSKRLVFYDN NKRASAVLDL IHCDLWGPSP VASVAGYSYF VIFVDDFSRF TWFYPLRHKS
NFYDVLVRFK VFVENQFSRF IKVFQSDNGT EFTNNKVQDL FASSGVLHRF SCPHTQAQNG
RVERKHRHVL EIGLAMLYQS HVPTRYWVDA FSSAVYIINR VPSQVLSGQI PSGKIPFTLL
FQVAPTYANF HPFGCRVFPC LRPYMKSKFS HRSSPCIFLG YSSHHKGFKC LDLTTSRIYV
SHHAQFDETC FPFAASISSF YEPITGFNSS SMFVSSSLPT RPPLVTTLSC PSCVSLDAAL
ARHPAPPVLP ASSEPVSPPR TLSPASASLI VLPASSDASI QPAPVAIRMQ TRSQNGIFRP
NLRYALAHHQ PTALLTALHV AADPKGFKSA MKHPQWLAAM EDELSALRNN HTWTLVPRPS
APNIVGSKWV FRTKHKSDGT IERLKAHLVA QGFTQIPGFH YSLTFSPVVM ATIIRLILSL
VVLNGWPLHQ LDVKNAFLHG HLTETVYMEQ PSGFVDPRFL THVCRLNKAL YGLKQAPRAW
FQCLSSFLMR SGFICSRADP SLFFFYRGRI TTSPDLMYQL KGASIFSKIN LRSGYHQIRV
KEGDIPKTAF RTRYGHYEYV VILFGVTNAP VVFIDYMNRI FRPFLDKFVV VFIDDILIYS
RTLEEHGEHL RLVLEILKEN
//
