ID A0A164G6I2_9CRUS Unreviewed; 153 AA.
AC A0A164G6I2;
DT 06-JUL-2016, integrated into UniProtKB/TrEMBL.
DT 06-JUL-2016, sequence version 1.
DT 24-JAN-2024, entry version 25.
DE RecName: Full=DNA-directed RNA polymerase {ECO:0008006|Google:ProtNLM};
DE Flags: Fragment;
GN ORFNames=APZ42_005922 {ECO:0000313|EMBL:KZR98587.1};
OS Daphnia magna.
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Branchiopoda;
OC Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia.
OX NCBI_TaxID=35525 {ECO:0000313|EMBL:KZR98587.1, ECO:0000313|Proteomes:UP000076858};
RN [1] {ECO:0000313|EMBL:KZR98587.1, ECO:0000313|Proteomes:UP000076858}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Xinb3 {ECO:0000313|EMBL:KZR98587.1,
RC ECO:0000313|Proteomes:UP000076858};
RC TISSUE=Complete organism {ECO:0000313|EMBL:KZR98587.1};
RA Gilbert D.G., Choi J.-H., Mockaitis K., Colbourne J., Pfrender M.;
RT "EvidentialGene: Evidence-directed Construction of Genes on Genomes.";
RL Submitted (MAR-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KZR98587.1}.
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DR EMBL; LRGB01016496; KZR98587.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A164G6I2; -.
DR STRING; 35525.A0A164G6I2; -.
DR Proteomes; UP000076858; Unassembled WGS sequence.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:InterPro.
DR GO; GO:0046983; F:protein dimerization activity; IEA:InterPro.
DR GO; GO:0006351; P:DNA-templated transcription; IEA:InterPro.
DR Gene3D; 1.10.150.20; 5' to 3' exonuclease, C-terminal subdomain; 1.
DR Gene3D; 3.30.1360.10; RNA polymerase, RBP11-like subunit; 1.
DR InterPro; IPR011263; DNA-dir_RNA_pol_RpoA/D/Rpb3.
DR InterPro; IPR036603; RBP11-like.
DR InterPro; IPR011260; RNAP_asu_C.
DR Pfam; PF03118; RNA_pol_A_CTD; 1.
DR Pfam; PF01193; RNA_pol_L; 1.
DR SUPFAM; SSF47789; C-terminal domain of RNA polymerase alpha subunit; 1.
DR SUPFAM; SSF55257; RBP11-like subunits of RNA polymerase; 1.
PE 4: Predicted;
KW DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478};
KW Reference proteome {ECO:0000313|Proteomes:UP000076858};
KW Transcription {ECO:0000256|ARBA:ARBA00023163}.
FT DOMAIN 12..61
FT /note="DNA-directed RNA polymerase RpoA/D/Rpb3-type"
FT /evidence="ECO:0000259|Pfam:PF01193"
FT DOMAIN 90..146
FT /note="RNA polymerase alpha subunit C-terminal"
FT /evidence="ECO:0000259|Pfam:PF03118"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:KZR98587.1"
FT NON_TER 153
FT /evidence="ECO:0000313|EMBL:KZR98587.1"
SQ SEQUENCE 153 AA; 16666 MW; 2098547133C20E10 CRC64;
LGRIVLDASF SPVKRVSYTV ESARVEQRTD LDKLVIEIET NGAITAEDAV RASSKILVEQ
LAVFAQLEGS ELSAFDAPAV RGGAGSFDPI LLRPVDELEH TVRSANCLKA ENIYYIGDLI
QRTENELLKT PNLGRKSLNE IKEVLASRGL TLG
//