ID   A0A164KGM9_9CRUS        Unreviewed;      2128 AA.
AC   A0A164KGM9;
DT   06-JUL-2016, integrated into UniProtKB/TrEMBL.
DT   06-JUL-2016, sequence version 1.
DT   24-JAN-2024, entry version 32.
DE   SubName: Full=Putative U5 small nuclear ribonucleoprotein 200 kDa helicase {ECO:0000313|EMBL:KZS03246.1};
GN   ORFNames=APZ42_034079 {ECO:0000313|EMBL:KZS03246.1};
OS   Daphnia magna.
OC   Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Branchiopoda;
OC   Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia.
OX   NCBI_TaxID=35525 {ECO:0000313|EMBL:KZS03246.1, ECO:0000313|Proteomes:UP000076858};
RN   [1] {ECO:0000313|EMBL:KZS03246.1, ECO:0000313|Proteomes:UP000076858}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Xinb3 {ECO:0000313|EMBL:KZS03246.1,
RC   ECO:0000313|Proteomes:UP000076858};
RC   TISSUE=Complete organism {ECO:0000313|EMBL:KZS03246.1};
RA   Gilbert D.G., Choi J.-H., Mockaitis K., Colbourne J., Pfrender M.;
RT   "EvidentialGene: Evidence-directed Construction of Genes on Genomes.";
RL   Submitted (MAR-2016) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KZS03246.1}.
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DR   EMBL; LRGB01003325; KZS03246.1; -; Genomic_DNA.
DR   STRING; 35525.A0A164KGM9; -.
DR   Proteomes; UP000076858; Unassembled WGS sequence.
DR   GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR   GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0010467; P:gene expression; IEA:UniProt.
DR   GO; GO:0090304; P:nucleic acid metabolic process; IEA:UniProt.
DR   CDD; cd18020; DEXHc_ASCC3_1; 1.
DR   CDD; cd18022; DEXHc_ASCC3_2; 1.
DR   CDD; cd18795; SF2_C_Ski2; 2.
DR   Gene3D; 1.10.150.20; 5' to 3' exonuclease, C-terminal subdomain; 1.
DR   Gene3D; 2.60.40.150; C2 domain; 2.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 4.
DR   Gene3D; 1.10.3380.10; Sec63 N-terminal domain-like domain; 2.
DR   Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR   InterPro; IPR003593; AAA+_ATPase.
DR   InterPro; IPR035892; C2_domain_sf.
DR   InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR   InterPro; IPR014001; Helicase_ATP-bd.
DR   InterPro; IPR001650; Helicase_C.
DR   InterPro; IPR014756; Ig_E-set.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   InterPro; IPR004179; Sec63-dom.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   PANTHER; PTHR47961; DNA POLYMERASE THETA, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G05260)-RELATED; 1.
DR   PANTHER; PTHR47961:SF13; SEC63 DOMAIN-CONTAINING PROTEIN; 1.
DR   Pfam; PF00270; DEAD; 2.
DR   Pfam; PF00271; Helicase_C; 2.
DR   Pfam; PF02889; Sec63; 2.
DR   PIRSF; PIRSF039073; BRR2; 2.
DR   SMART; SM00382; AAA; 2.
DR   SMART; SM00487; DEXDc; 2.
DR   SMART; SM00490; HELICc; 2.
DR   SMART; SM00973; Sec63; 2.
DR   SUPFAM; SSF81296; E set domains; 1.
DR   SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 3.
DR   SUPFAM; SSF158702; Sec63 N-terminal domain-like; 2.
DR   SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR   PROSITE; PS51192; HELICASE_ATP_BIND_1; 2.
DR   PROSITE; PS51194; HELICASE_CTER; 2.
PE   4: Predicted;
KW   ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW   Helicase {ECO:0000256|ARBA:ARBA00022806, ECO:0000313|EMBL:KZS03246.1};
KW   Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW   Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW   Reference proteome {ECO:0000313|Proteomes:UP000076858};
KW   Ribonucleoprotein {ECO:0000313|EMBL:KZS03246.1}.
FT   DOMAIN          464..648
FT                   /note="Helicase ATP-binding"
FT                   /evidence="ECO:0000259|PROSITE:PS51192"
FT   DOMAIN          675..897
FT                   /note="Helicase C-terminal"
FT                   /evidence="ECO:0000259|PROSITE:PS51194"
FT   DOMAIN          1315..1490
FT                   /note="Helicase ATP-binding"
FT                   /evidence="ECO:0000259|PROSITE:PS51192"
FT   DOMAIN          1523..1715
FT                   /note="Helicase C-terminal"
FT                   /evidence="ECO:0000259|PROSITE:PS51194"
SQ   SEQUENCE   2128 AA;  241139 MW;  BA07819CB0A25516 CRC64;
     MKPNPRLSRA LRAFTNLSSP ICGKLTDTSS HYLSELRIKQ QEQDNKITWT KLASELEKSG
     KSSTEIRGLL SPLRQVAQKI MGDECGTKVI EDCAISLLLF FFEMENVTPK SLSSFGFGVI
     DLSLGKETLK IVRNLISKLP ETVLKYLKSE NSEEPVTEFG KDVKVYPIDE LSENGVDMLM
     DWGNTASNFD GLTKKDISFK WEDSKTNDSR IFERKVHGRG WLEQQLALSG GNSLNIPITD
     LVDSIMSVIC SNKSDDELQT EFFDLLGFDR FELIQDLLEN RKEMKKAEKS IATQVAIASS
     KVKPYSAGPV ISGQVLVQSA QEKDLMKQIR REEKRFQKLR QGYENDVEEA ASMKMFQEQQ
     LVVASTLPIM KHSASRTVKY PNVYDSIAEA KQSSAFVGGK KMALPESATR TNTSRYEEIN
     IPLTEPAPTE VGNQLIPIAS LDDISRKAFA NCKNLNKIQT VVFETAYRTN ENMLICAPTG
     AGKTNIAMLT ILQQVKQYIT NGVLERKDQF KIVYVAPMKA LAAEMAENFG KRLAPLGLVV
     RELTGDMQLT KSEIMATQML ITTPEKWDVI TRKSTGDIAL TQLVKLLIID EVHLLHGDRG
     PVVEALVART LRQVESSQMM IRILGLSATL PNYVDVAQFL HVNPYKGLFY FDSRFRPVPL
     SQTFIGVKEV NPMRQMQQMD FVCYDKVVAM VQQGHQVMVF VHARNATLKT AQTLRMQAQE
     KNQLHLFQPE NNSGFNTAMK NAGKSRNRHL VDLLKDGFAI HHAGMLRSDR NLVEKMFSDG
     MARVLVCTAT LAWGVNLPAH AVIIKGTEIY DAKHGSFVDI GILDVLQIFG RAGRPQFDKS
     GHGTIITSHD KLAHYLSLLT CQYPIESSFE KSMTDNLNAE ITLGTVANVD EAVQWLSYTY
     LFIRMRKNPI AYGINLEQIF DDPQLGGKRR ELIVLAARAL DKARMIRFEE KTGMLHATDL
     GRTASHFYIK YDTVEIFNEL MHPAMNDAEI FGLISMATEF DQLKVRDDEL DELDDYLHTY
     CELPVSGGSE NIHGKVNILM QTYISRGPVN SFSLISDQSF IVQNASRIAR ALFEIVLRKN
     WPLMSGRVLR VSNMIEQRVW DSQHPLRQFA TLGQDILIKL EEKKLSLERL REMDSKEIGF
     MIQNQRSGPI VKRNASEFPY LEVDATVQPI TRTVLRIRLC IRPDFRWNDR IHGLSSEPFW
     MWVEDPENNT TYHYESISLS KKQVTRREEQ VIVFTIPIFE PLPSQYYIRI VSDRWLRCET
     TFPISFQQLI LPERHPPHTG LLDLKPLPVT ALKNPEWQSL YSFPYFNPIQ TQLFHVLYHT
     DHNVLLGAPT GSGKTIVAEI AMFRVFREYP KSKVVYIAPM KALVRERMED WRERLGRRLG
     KNVVELTGDV TPDVRAISRA DVIVTTPEKW DGVSRSWQTR DYVRAVALII IDEIHLLGED
     RGPVLEVIVS RTNFIASHTG RSLRLIGLST AVANARDLAD WLNIGQVGLF NFRPSVRPVP
     LEVHISGFPG KHYCPRMATM NKPTFQAIKQ HSPDKPVLVF VSSRRQTRLT ALDLIGYLAA
     EDSPRQFVRM PERDMEQLTI SIKDPNLKLT LSFGVGIHHA GLTEKDRRLV EELFVNQKIQ
     VLIATATLAW GVNFPAHLVV IKGTEYYDGK SRRYVDMPIT DVLQMMGRAG RPQYDDHGVA
     CVFVHDIKKD FYKKFLYEPF PVESSLLDRS LSVLEAASCT EIEEDGRVAP TSLGRIASYY
     YLSYHTLQLF RDRLNQDTTL EDLLSILSDA HEYSELPVRH NEDLLNTELA KKCVLPVNPY
     TYDSPHTKAH LLFQAHFSRL SLPCADYATD TKSVLDQAIR ILQAMMDVSA EGGWLATTLR
     IQQLLQMVIQ ALWIDDPAVL MLPHFNTFIL PVLRTRQEQL MHLPVLQKAF AVDFAKLSNL
     LSMDLSPDQI QEVRQVISNL PVIDISMSVL WGTTSTSLSI IPNCGLHDAK WIDVPADQEC
     LLDITFARQS LLEATPVVTG GARPKKSASV QSVAADNGTN QTGRSRSVYA PKFPKSKDEG
     WFLTLGSVEK QELLALKRVT LPRIKCSHQL SFTTPKKLGR LMLTFYFMSD SYVGLDQQYT
     VYLNVCKAKR TEFDDYEADN DIYGNKIE
//