ID A0A171DEZ1_9ACTN Unreviewed; 1297 AA.
AC A0A171DEZ1;
DT 06-JUL-2016, integrated into UniProtKB/TrEMBL.
DT 06-JUL-2016, sequence version 1.
DT 27-MAR-2024, entry version 27.
DE SubName: Full=ATP-dependent RNA helicase HrpA {ECO:0000313|EMBL:GAT68189.1};
GN ORFNames=PS9374_03850 {ECO:0000313|EMBL:GAT68189.1};
OS Planomonospora sphaerica.
OC Bacteria; Actinomycetota; Actinomycetes; Streptosporangiales;
OC Streptosporangiaceae; Planomonospora.
OX NCBI_TaxID=161355 {ECO:0000313|EMBL:GAT68189.1, ECO:0000313|Proteomes:UP000077701};
RN [1] {ECO:0000313|EMBL:GAT68189.1, ECO:0000313|Proteomes:UP000077701}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JCM 9374 {ECO:0000313|EMBL:GAT68189.1,
RC ECO:0000313|Proteomes:UP000077701};
RA Dohra H., Suzuki T., Inoue Y., Kodani S.;
RT "Draft Genome Sequence of Planomonospora sphaerica JCM9374, a Rare
RT Actinomycete.";
RL Genome Announc. 4:e00779-16(2016).
RN [2] {ECO:0000313|Proteomes:UP000077701}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JCM 9374 {ECO:0000313|Proteomes:UP000077701};
RA Suzuki T., Dohra H., Kodani S.;
RT "Planomonospora sphaerica JCM9374 whole genome shotgun sequence.";
RL Submitted (APR-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:GAT68189.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; BDCX01000009; GAT68189.1; -; Genomic_DNA.
DR RefSeq; WP_068898531.1; NZ_BDCX01000009.1.
DR STRING; 161355.PS9374_03850; -.
DR OrthoDB; 9805617at2; -.
DR Proteomes; UP000077701; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0003724; F:RNA helicase activity; IEA:InterPro.
DR CDD; cd17989; DEXHc_HrpA; 1.
DR CDD; cd18791; SF2_C_RHA; 1.
DR Gene3D; 1.20.120.1080; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR011709; DEAD-box_helicase_OB_fold.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR048333; HA2_WH.
DR InterPro; IPR007502; Helicase-assoc_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR024590; HrpA_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR010222; RNA_helicase_HrpA.
DR NCBIfam; TIGR01967; DEAH_box_HrpA; 1.
DR PANTHER; PTHR18934; ATP-DEPENDENT RNA HELICASE; 1.
DR PANTHER; PTHR18934:SF83; PRE-MRNA-SPLICING FACTOR ATP-DEPENDENT RNA HELICASE DHX16; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF11898; DUF3418; 1.
DR Pfam; PF21010; HA2_C; 1.
DR Pfam; PF04408; HA2_N; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF07717; OB_NTP_bind; 1.
DR SMART; SM00382; AAA; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00847; HA2; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Helicase {ECO:0000313|EMBL:GAT68189.1};
KW Hydrolase {ECO:0000313|EMBL:GAT68189.1};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000077701}.
FT DOMAIN 88..251
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 273..438
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
SQ SEQUENCE 1297 AA; 146677 MW; DED5742CD80D8BD6 CRC64;
MGTPPLTSPL ADLHARLPEL TLRDQRRLGR RLDGARRVRN RAAQQKIAAE IGADIERAER
RIAERRAGVP AVTYPEALPV SRRRDDILEA IRDHQVVIVA GETGSGKTTQ LPKICLELGR
GVRGLIGHTQ PRRIAARTVA ERVAEELGGS LGEAVGYKVR FTDQVGEGTL VKVMTDGILL
AELQGDRDLA QYDTLIIDEA HERSLNIDFI LGYLKQLLPR RPDLKVIITS ATIDPERFSR
HFGDAPIVEV SGRTYPVEVR YRPVGEDDDQ IQAIGDAVDE LCREGPGDVL VFLSGEREIR
DTADALSKRR DIEVLPLYAR LSAAEQHKVF ARHTGRRVVL ATNVAETSLT VPGIKYVVDT
GFARISRYSH RTKVQRLPIE AISQASANQR KGRCGRVSEG VCIRLYEEED FLARPEFTDP
EILRTNLASV ILQMTSIGLG DIAAFPFVEP PDQRQVKDGF DLLVELGAFD AAKRITPLGR
KLAGLPVDPR LARMVLEADH NGCAREVMVI AAALSIQDPR ERPADKQQAA DEMHRRFADK
ESDFVSYLNL WNHLQEKQQE LSSSAFRRLC RAEFLNYLRV REWQDVYSQL RQMSKSLGVT
LNSTPGDEQK IHVSLLSGLL SHVGVKDIDK KGPQEGQRRP MTEYIGARNA RFAIFPGSAL
AKKQPLWVMS AELVETSRLW ARVNAKIEPE WVEPLAQHLI KRTYSEPHWE KKQAAVIAYE
KVTLYGVPIV AQRKVNYGRI DPELSRELFI RHALVEGDWE THHAFFAANR RLLEEVGELE
ERARRRDILV DDETLFDFYD RRVGQEVVSG RHFDSWWKKA RQADPDLLNF EKSMLISETA
GDVSQRDYPD VWRQGGLRFP LTYQFEPGAD ADGVTAHIPL SLLNQVNVEG FDWQIPGLRE
ELLTALIRSL PKNIRRNFVP APNYARQVLQ RAEPTQEPLL AVLERELLRL TGIQVPREAW
QLDQVPDHLK ITFRVLDGRK HKLAESKDLA ELKRRLAPKL RQTLSKAAGM ERTGLTDWSL
GELPKTFEQR RMKAYPALAD EGSSVAVRMF ETEAEQRRAM WEGTRRLLLL GIPSPAKWVL
GRLGNQAKLT LSRSPHAGAT ALFDDCIACA ADKLMAEHGG PVWDEAAFAA LRDKVRADLF
DTTAEVVSRV EGILAVWHAV SGRLAEARST PAVEDVRDQV ANLVYPGFVT DTGYGRLPDL
LRYLKAAERR LDKLPEDPYR DEQRMHQVHD VEDDYHDLVE KLPPARRGDE EVRRIRWMIE
ELRVSYFAQS LGTPYSISDK RIRKVMEGID LGVSFQR
//
