ID A0A176WP21_MARPO Unreviewed; 678 AA.
AC A0A176WP21;
DT 07-SEP-2016, integrated into UniProtKB/TrEMBL.
DT 07-SEP-2016, sequence version 1.
DT 27-MAR-2024, entry version 25.
DE RecName: Full=XPG-I domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=AXG93_3005s1320 {ECO:0000313|EMBL:OAE33986.1};
OS Marchantia polymorpha subsp. ruderalis.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Marchantiophyta;
OC Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia.
OX NCBI_TaxID=1480154 {ECO:0000313|EMBL:OAE33986.1, ECO:0000313|Proteomes:UP000077202};
RN [1] {ECO:0000313|EMBL:OAE33986.1, ECO:0000313|Proteomes:UP000077202}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Tak-1 and cv. Tak-2 {ECO:0000313|Proteomes:UP000077202};
RC TISSUE=Whole gametophyte {ECO:0000313|EMBL:OAE33986.1};
RA Honkanen S., Jones V.A., Morieri G., Champion C., Hetherington A.J.,
RA Kelly S., Saint-Marcoux D., Proust H., Prescott H., Dolan L.;
RT "Mechanisms controlling the formation of the plant cell surface in tip-
RT growing cells are functionally conserved among land plants.";
RL Submitted (MAR-2016) to the EMBL/GenBank/DDBJ databases.
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC Evidence={ECO:0000256|ARBA:ARBA00001946};
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:OAE33986.1}.
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DR EMBL; LVLJ01000465; OAE33986.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A176WP21; -.
DR OrthoDB; 26655at2759; -.
DR Proteomes; UP000077202; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0004520; F:DNA endonuclease activity; IEA:UniProt.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd09869; PIN_GEN1; 1.
DR Gene3D; 1.10.150.20; 5' to 3' exonuclease, C-terminal subdomain; 1.
DR Gene3D; 3.40.50.1010; 5'-nuclease; 1.
DR InterPro; IPR036279; 5-3_exonuclease_C_sf.
DR InterPro; IPR008918; HhH2.
DR InterPro; IPR029060; PIN-like_dom_sf.
DR InterPro; IPR006086; XPG-I_dom.
DR InterPro; IPR006084; XPG/Rad2.
DR InterPro; IPR006085; XPG_DNA_repair_N.
DR PANTHER; PTHR11081; FLAP ENDONUCLEASE FAMILY MEMBER; 1.
DR PANTHER; PTHR11081:SF59; FLAP ENDONUCLEASE GEN-LIKE 1; 1.
DR Pfam; PF00867; XPG_I; 1.
DR Pfam; PF00752; XPG_N; 1.
DR PRINTS; PR00853; XPGRADSUPER.
DR SMART; SM00279; HhH2; 1.
DR SMART; SM00484; XPGI; 1.
DR SMART; SM00485; XPGN; 1.
DR SUPFAM; SSF47807; 5' to 3' exonuclease, C-terminal subdomain; 1.
DR SUPFAM; SSF88723; PIN domain-like; 1.
PE 4: Predicted;
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Magnesium {ECO:0000256|ARBA:ARBA00022842};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Reference proteome {ECO:0000313|Proteomes:UP000077202}.
FT DOMAIN 1..97
FT /note="XPG N-terminal"
FT /evidence="ECO:0000259|SMART:SM00485"
FT DOMAIN 131..212
FT /note="XPG-I"
FT /evidence="ECO:0000259|SMART:SM00484"
FT REGION 97..116
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 263..285
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 641..678
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 641..659
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 678 AA; 75750 MW; F3014B8A2F4B1F4F CRC64;
MGVGKGFWEQ LRPLARTEDL SFLRGKRLAV DLSYWLVQQQ TALKDHRVRK PHLRLTFFRV
VKLVAKVGAL PVFVVDGEPP ALKQGVRMKR FKRFSSLCPP SPPHSPATTE SVSTRNGSFS
ANVEECVILL ELLGMPVLRA EGEAESLCAI LNREGLVDAC VSPDSDVFVH GAKWVIKTLQ
LDNKSKARPS LSVEESEVEL YRAEDIEASM GLRRNHLVAL ALLIGCDYMP EGVAGVGCAN
AFQLIRSFPE SEILDRLRAW GRGEGPSEGE IEQGAQDDGS GREPSVAYDS EVQIRVTHCS
KCGHPGNKKE HLNSGCGICF PSREDEYSFE KGCKPKPKGF LCSCPFCSQK ARSKLQTKAN
AWWGKMCSKM AATPGFPNEE IIKIFLNSEI PTFEDVTGYA SSIKWHAPAM DELEMFLQKH
LSWDSFYVRQ KALPLLSHFY LSDLADKYCK SSEELLNGAF APLCIHRIKI EHGEPLYVLK
WKNMREGVDG EQWLGLKLNS TSPKHIEETV AKECRTDNEC VDLLSTEATE KEWCFTTDES
MESIKAACPE LVEEFDRSQE AKQAARKKAS KRKKVEGIES AKRQSDITSF FKVEHDLHKN
KLTESPQFER KCELGSPHTL ERTAAGLDYI DTEALVASLN SNSKSTTFSS TSPPLTRTRR
RSFPTKVVRK LSYGEGAG
//
