ID A0A1B6PA39_SORBI Unreviewed; 267 AA.
AC A0A1B6PA39;
DT 02-NOV-2016, integrated into UniProtKB/TrEMBL.
DT 02-NOV-2016, sequence version 1.
DT 27-MAR-2024, entry version 22.
DE RecName: Full=Small-subunit processome Utp12 domain-containing protein {ECO:0000259|Pfam:PF04003};
GN ORFNames=SORBI_3009G219400 {ECO:0000313|EMBL:KXG22471.1};
OS Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX NCBI_TaxID=4558 {ECO:0000313|EMBL:KXG22471.1, ECO:0000313|Proteomes:UP000000768};
RN [1] {ECO:0000313|EMBL:KXG22471.1, ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=19189423; DOI=10.1038/nature07723;
RA Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman,
RA Ware D., Westhoff P., Mayer K.F., Messing J., Rokhsar D.S.;
RT "The Sorghum bicolor genome and the diversification of grasses.";
RL Nature 457:551-556(2009).
RN [2] {ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=29161754; DOI=10.1111/tpj.13781;
RA McCormick R.F., Truong S.K., Sreedasyam A., Jenkins J., Shu S., Sims D.,
RA Kennedy M., Amirebrahimi M., Weers B.D., McKinley B., Mattison A.,
RA Morishige D.T., Grimwood J., Schmutz J., Mullet J.E.;
RT "The Sorghum bicolor reference genome: improved assembly, gene annotations,
RT a transcriptome atlas, and signatures of genome organization.";
RL Plant J. 93:338-354(2018).
CC -!- SIMILARITY: Belongs to the UTP5 family.
CC {ECO:0000256|ARBA:ARBA00038335}.
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DR EMBL; CM000768; KXG22471.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A1B6PA39; -.
DR EnsemblPlants; KXG22471; KXG22471; SORBI_3009G219400.
DR Gramene; KXG22471; KXG22471; SORBI_3009G219400.
DR eggNOG; KOG4547; Eukaryota.
DR OMA; IVTHGGY; -.
DR Proteomes; UP000000768; Chromosome 9.
DR ExpressionAtlas; A0A1B6PA39; baseline.
DR GO; GO:0005634; C:nucleus; IEA:UniProt.
DR InterPro; IPR007148; SSU_processome_Utp12.
DR PANTHER; PTHR44267; WD REPEAT-CONTAINING PROTEIN 43; 1.
DR PANTHER; PTHR44267:SF1; WD REPEAT-CONTAINING PROTEIN 43; 1.
DR Pfam; PF04003; Utp12; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000000768}.
FT DOMAIN 106..204
FT /note="Small-subunit processome Utp12"
FT /evidence="ECO:0000259|Pfam:PF04003"
FT REGION 1..38
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 210..267
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..15
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 226..254
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 267 AA; 29658 MW; 971E9B98509103CE CRC64;
MDLQEKTTPT HQGKEKKKGS AKKKERGKKR TSSVLDSANG TVISEEMSEY NLDEPTMEEK
LATLNLINRE NGMSDTEKQS LSMAPPSADS VHILLKQALR ADDNVALLTC LHNRDEKVIT
KSISLLTPAD VVKLLKFFVL QIQSRGAVLV CLLPWLQTLL SRHMSSIVSQ ESSLSLLNSL
YQLIDARTST FKSALQLSTT LDYLFSEIAD DEADEEEVPP PIIYEDKDTD DEESEVDAME
TDREEAEELG DVTDASENSD GSEIMSD
//
