ID A0A1B6PB74_SORBI Unreviewed; 585 AA.
AC A0A1B6PB74;
DT 02-NOV-2016, integrated into UniProtKB/TrEMBL.
DT 27-SEP-2017, sequence version 2.
DT 27-MAR-2024, entry version 28.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=SORBI_3008G022701 {ECO:0000313|EMBL:KXG22891.2};
OS Sorghum bicolor (Sorghum) (Sorghum vulgare).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade;
OC Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum.
OX NCBI_TaxID=4558 {ECO:0000313|EMBL:KXG22891.2, ECO:0000313|Proteomes:UP000000768};
RN [1] {ECO:0000313|EMBL:KXG22891.2, ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=19189423; DOI=10.1038/nature07723;
RA Paterson A.H., Bowers J.E., Bruggmann R., Dubchak I., Grimwood J.,
RA Gundlach H., Haberer G., Hellsten U., Mitros T., Poliakov A., Schmutz J.,
RA Spannagl M., Tang H., Wang X., Wicker T., Bharti A.K., Chapman J.,
RA Feltus F.A., Gowik U., Grigoriev I.V., Lyons E., Maher C.A., Martis M.,
RA Narechania A., Otillar R.P., Penning B.W., Salamov A.A., Wang Y., Zhang L.,
RA Carpita N.C., Freeling M., Gingle A.R., Hash C.T., Keller B., Klein P.,
RA Kresovich S., McCann M.C., Ming R., Peterson D.G., Mehboob-ur-Rahman,
RA Ware D., Westhoff P., Mayer K.F., Messing J., Rokhsar D.S.;
RT "The Sorghum bicolor genome and the diversification of grasses.";
RL Nature 457:551-556(2009).
RN [2] {ECO:0000313|Proteomes:UP000000768}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. BTx623 {ECO:0000313|Proteomes:UP000000768};
RX PubMed=29161754; DOI=10.1111/tpj.13781;
RA McCormick R.F., Truong S.K., Sreedasyam A., Jenkins J., Shu S., Sims D.,
RA Kennedy M., Amirebrahimi M., Weers B.D., McKinley B., Mattison A.,
RA Morishige D.T., Grimwood J., Schmutz J., Mullet J.E.;
RT "The Sorghum bicolor reference genome: improved assembly, gene annotations,
RT a transcriptome atlas, and signatures of genome organization.";
RL Plant J. 93:338-354(2018).
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; CM000767; KXG22891.2; -; Genomic_DNA.
DR AlphaFoldDB; A0A1B6PB74; -.
DR EnsemblPlants; KXG22891; KXG22891; SORBI_3008G022701.
DR Gramene; KXG22891; KXG22891; SORBI_3008G022701.
DR InParanoid; A0A1B6PB74; -.
DR OMA; SAMNTSC; -.
DR Proteomes; UP000000768; Chromosome 8.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 5.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 7.
DR PANTHER; PTHR47941:SF55; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR47941; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3, MITOCHONDRIAL; 1.
DR Pfam; PF12854; PPR_1; 1.
DR Pfam; PF13041; PPR_2; 4.
DR PROSITE; PS51375; PPR; 7.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000000768};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT REPEAT 199..233
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 234..268
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 269..303
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 304..338
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 339..373
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 374..408
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 424..458
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 585 AA; 64785 MW; 4AC00F32A7E1C036 CRC64;
MLSLPLRRRH LLLRLCARRN PTFLRLSIAA SAAALSTAPT VASAAAATPI SDRLRVLRSL
HAVAPDHLLS HPLPSSAHVC LAAHLAARAR LFAHSRRLLS RLLGAGHRPH LAASLVDLLH
RAALALGPRR SALPSVVDTL LSLLADHGLL DDAVRALARV RQLRVPPNTR TCNHILLRLA
RNRQGGLVRR LFDLLPVPNV FTFNIVIDFL CKEGELVEAR ALFVRMKAMG CSPDVVTYNS
LIDGYGKCGD LEEVEQLVSE MRKSGCAADV VTYNALINCF SKFGRMEKAY SYFGEMKRQG
VVANVVTFST FVDAFCKEGL VQEAMKLFAQ MRVRGMMPNE FTYTSLVDGT CKAGRLDDAI
VLLDEMVHQG LVPNVVTYTV MVDGLCKEGK VAEADNVLSL MERGGVKANE LLYTTLIHGH
FMNNNIVYTS LIDGYMKQAN LQDAFALKTK MIESGLQLDL YCYTCFISGF CNMNMMQEAR
GELSVLGAHG KQHLENGSAM NTSCSRYQLK DMSWRSKDPA VNGKENHGQE AVHEENTKSC
DHKYGSYCLC FAEKLEKMEH TIERAESCEV GFPNVEWKLR QLVAT
//
