ID A0L6K8_MAGMM Unreviewed; 829 AA.
AC A0L6K8;
DT 12-DEC-2006, integrated into UniProtKB/TrEMBL.
DT 12-DEC-2006, sequence version 1.
DT 27-MAR-2024, entry version 98.
DE SubName: Full=ATP-dependent helicase HrpB {ECO:0000313|EMBL:ABK43601.1};
GN OrderedLocusNames=Mmc1_1083 {ECO:0000313|EMBL:ABK43601.1};
OS Magnetococcus marinus (strain ATCC BAA-1437 / JCM 17883 / MC-1).
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Magnetococcales;
OC Magnetococcaceae; Magnetococcus.
OX NCBI_TaxID=156889 {ECO:0000313|EMBL:ABK43601.1, ECO:0000313|Proteomes:UP000002586};
RN [1] {ECO:0000313|Proteomes:UP000002586}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-1437 / JCM 17883 / MC-1
RC {ECO:0000313|Proteomes:UP000002586};
RX PubMed=19465526; DOI=10.1128/AEM.02874-08;
RA Schubbe S., Williams T.J., Xie G., Kiss H.E., Brettin T.S., Martinez D.,
RA Ross C.A., Schuler D., Cox B.L., Nealson K.H., Bazylinski D.A.;
RT "Complete genome sequence of the chemolithoautotrophic marine magnetotactic
RT coccus strain MC-1.";
RL Appl. Environ. Microbiol. 75:4835-4852(2009).
RN [2] {ECO:0000313|EMBL:ABK43601.1, ECO:0000313|Proteomes:UP000002586}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-1437 / JCM 17883 / MC-1
RC {ECO:0000313|Proteomes:UP000002586};
RX PubMed=22581902;
RA Bazylinski D.A., Williams T.J., Lefevre C.T., Berg R.J., Zhang C.L.,
RA Bowser S.S., Dean A.J., Beveridge T.J.;
RT "Magnetococcus marinus gen. nov., sp. nov., a marine, magnetotactic
RT bacterium that represents a novel lineage (Magnetococcaceae fam. nov.;
RT Magnetococcales ord. nov.) at the base of the Alphaproteobacteria.";
RL Int. J. Syst. Evol. Microbiol. 0:0-0(2012).
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DR EMBL; CP000471; ABK43601.1; -; Genomic_DNA.
DR RefSeq; WP_011712758.1; NC_008576.1.
DR AlphaFoldDB; A0L6K8; -.
DR STRING; 156889.Mmc1_1083; -.
DR KEGG; mgm:Mmc1_1083; -.
DR eggNOG; COG1643; Bacteria.
DR HOGENOM; CLU_001832_5_6_5; -.
DR OrthoDB; 9805617at2; -.
DR Proteomes; UP000002586; Chromosome.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR CDD; cd17990; DEXHc_HrpB; 1.
DR CDD; cd18791; SF2_C_RHA; 1.
DR Gene3D; 1.20.120.1080; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR048333; HA2_WH.
DR InterPro; IPR007502; Helicase-assoc_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR010225; HrpB.
DR InterPro; IPR049614; HrpB_DEXH.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR013689; RNA_helicase_ATP-dep_HrpB_C.
DR NCBIfam; TIGR01970; DEAH_box_HrpB; 1.
DR PANTHER; PTHR43519; ATP-DEPENDENT RNA HELICASE HRPB; 1.
DR PANTHER; PTHR43519:SF1; ATP-DEPENDENT RNA HELICASE HRPB; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF04408; HA2_N; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF08482; HrpB_C; 1.
DR PIRSF; PIRSF005496; ATP_hel_hrpB; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00847; HA2; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Helicase {ECO:0000256|ARBA:ARBA00022806, ECO:0000313|EMBL:ABK43601.1};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000002586}.
FT DOMAIN 17..180
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 205..370
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 810..829
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 829 AA; 91101 MW; B4B500DDC29395F9 CRC64;
MFSPPDLPIV ATLQPLQAAL LRHPNVILSA PPGSGKTTVV PLALLDAPWL AGERILMLEP
RRLAARAAAS RMAELLQEPV GERVGYQIRF ERKVGPNTRV EVVTEGMLTR RLQSDPALQG
VGAILFDEFH ERSLQGDLGL ALALELQQLR DDLRLLVMSA TLESQRLAKL LGDAPIIEGH
GRSYPVQVRY ASQPYAHVVE GVVQTIRQAL AQERGDLLAF LPGAGEIRRV EAALRSGLPD
DVTLLPLYGE LGMQAQDRAV RPWLEGGRRV ILATDIAETS LTIPGIRVVV DGGLCKRPRF
HASSGLTRLE RLRISDASAQ QRAGRAGRLE PGVCYRIWPE SQQRMLQPAT PAEIREADLA
PLLLELALWG VADPTQMSWL DPPPEGAVAQ GWALLVALGA VDEARHITPL GRQMAQLPLH
PRLAHMVCMA PEPAAQAMAC DVAALLSERD PLKGGARQVD LHLRWQSVAQ FRRQGSAGPG
VDAASLQRIV RGADQLRHLL GVSRQQVAHG DLGLLLAAAY PDRVAQLRPG QRGRYLLASG
RGVRLDEMDP LSGEPLLVVA ALDAGEAEGR AYLAVSLAQE AFMALQPPAW QAQVVWSDQQ
QRVVAERQRC FGALVLERQP LHGEAPEAAV LAAMLVGVRR MGLAVLPWTP AAMQYQARVQ
LMARLESGWP LLEEAVLLEQ LEQWLAPFLR GVNRRAQLER LNMLEILQSQ LTWSQQQSLE
QALPTHYEVP SGSRIKLDYT AGAQPVLAVR IQELFGLAES PCLGQGRVPV TLHLLNPAQR
PVQVTSDLRG FWQTTWPQVR KELRGRYPKH HWPENPWQAQ ATARAKPRS
//
