ID A0PB12_PHODP Unreviewed; 223 AA.
AC A0PB12;
DT 09-JAN-2007, integrated into UniProtKB/TrEMBL.
DT 09-JAN-2007, sequence version 1.
DT 27-MAR-2024, entry version 68.
DE SubName: Full=Cyclic di-GMP phosphodiesterase YfgF {ECO:0000313|EMBL:GAW47523.1};
DE SubName: Full=Hypothrtical protein {ECO:0000313|EMBL:BAF38093.1};
GN ORFNames=P99018ORF_070 {ECO:0000313|EMBL:BAF38093.1}, PDPJ_4_00154
GN {ECO:0000313|EMBL:GAW47523.1};
OS Photobacterium damsela subsp. piscicida (causative agent of fish
OS pasteurellosis) (Pasteurella piscicida).
OG Plasmid pP0855 {ECO:0000313|EMBL:BBA46716.1}, and
OG Plasmid pP99-018 {ECO:0000313|EMBL:BAF38093.1}.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Photobacterium.
OX NCBI_TaxID=38294 {ECO:0000313|EMBL:BAF38093.1};
RN [1] {ECO:0000313|EMBL:BAF38093.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=PT99-018 {ECO:0000313|EMBL:BAF38093.1};
RC PLASMID=pP99-018 {ECO:0000313|EMBL:BAF38093.1};
RX PubMed=18070959; DOI=10.1128/AAC.01216-07;
RA Kim M.-J., Hirono I., Kurokawa K., Maki T., Hawke J., Kondo H.,
RA Santos M.D., Aoki T.;
RT "Complete DNA sequence and analysis of the transferable multiple-drug
RT resistance plasmids (R Plasmids) from Photobacterium damselae subsp.
RT piscicida isolates collected in Japan and the United States.";
RL Antimicrob. Agents Chemother. 52:606-611(2008).
RN [2] {ECO:0000313|EMBL:GAW47523.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=OT-51443 {ECO:0000313|EMBL:GAW47523.1};
RA Aoki T., Teru Y., Morimoto N., Kono T., Sakai M., Takano T., Hawke J.P.,
RA Fukuda Y., Takeyama H., Hikima J.;
RT "Complete Genome Sequence of Photobacterium damselae subsp. piscicida
RT Strain OT-51443 Isolated from Yellowtail (Seriola quinqueradiata) in
RT Japan.";
RL Genome Announc. 5:e00404-17(2017).
RN [3] {ECO:0000313|Proteomes:UP000196133}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=OT-51443 {ECO:0000313|Proteomes:UP000196133};
RA Hikima J., Teru Y., Sakai M., Takano T., Takeyama H., Aoki T.;
RT "Complete genome sequence of fish pathogenic bacteria, Photobacterium
RT damsela subsp. piscicida, strain OT-51443, isolated from yellowtail
RT (Seriola quinqueradiata) in Japan.";
RL Submitted (MAR-2017) to the EMBL/GenBank/DDBJ databases.
RN [4] {ECO:0000313|EMBL:BBA46716.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=P08-55 {ECO:0000313|EMBL:BBA46716.1};
RC PLASMID=pP0855 {ECO:0000313|EMBL:BBA46716.1};
RA Furushita M., Shiba T.;
RT "tetD plasmid of Photobacterium damselae subsp. piscicida isolated from
RT farmed yellowtail showing symptoms of pseudotuberculosis in Japan from 2003
RT to 2009.";
RL Submitted (MAR-2017) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; AB277723; BAF38093.1; -; Genomic_DNA.
DR EMBL; LC225353; BBA46716.1; -; Genomic_DNA.
DR EMBL; BDMQ01000004; GAW47523.1; -; Genomic_DNA.
DR RefSeq; WP_001337754.1; NZ_LC225353.1.
DR RefSeq; YP_908481.1; NC_008612.1.
DR RefSeq; YP_908660.1; NC_008613.1.
DR AlphaFoldDB; A0PB12; -.
DR GeneID; 84568415; -.
DR Proteomes; UP000196133; Unassembled WGS sequence.
DR CDD; cd01948; EAL; 1.
DR Gene3D; 3.20.20.450; EAL domain; 1.
DR InterPro; IPR001633; EAL_dom.
DR InterPro; IPR035919; EAL_sf.
DR PANTHER; PTHR33121; CYCLIC DI-GMP PHOSPHODIESTERASE PDEF; 1.
DR PANTHER; PTHR33121:SF71; CYCLIC DI-GMP PHOSPHODIESTERASE PDEF; 1.
DR Pfam; PF00563; EAL; 1.
DR SMART; SM00052; EAL; 1.
DR SUPFAM; SSF141868; EAL domain-like; 1.
DR PROSITE; PS50883; EAL; 1.
PE 4: Predicted;
KW Plasmid {ECO:0000313|EMBL:BAF38093.1}.
FT DOMAIN 1..223
FT /note="EAL"
FT /evidence="ECO:0000259|PROSITE:PS50883"
SQ SEQUENCE 223 AA; 25580 MW; 6F48F56560C9D8A7 CRC64;
MIFAPAFQPI KDVGTGSFVA AEVLARWYDE GRVLTPSSLS SPPYWGLVDM EMARFIQDNL
HYCLDLYPAL FLNVSEHTLQ SDVIFKAWWR VVRDIAKNHS SRLVIEITEG IQDASLALRW
EALTEIGVEL ALDDYGDKNS SLERLSRYDW HYCKFDARRL RSLEDYSAIL HCRRKGIQLI
AEQVESFPLG ESAKLLGLSW QQGFYHGKPA VMEKHLNYVK ALP
//
