ID A1HMY5_9FIRM Unreviewed; 294 AA.
AC A1HMY5;
DT 06-FEB-2007, integrated into UniProtKB/TrEMBL.
DT 06-FEB-2007, sequence version 1.
DT 27-MAR-2024, entry version 36.
DE RecName: Full=YicC N-terminal domain protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=TcarDRAFT_2088 {ECO:0000313|EMBL:EAX48616.1};
OS Thermosinus carboxydivorans Nor1.
OC Bacteria; Bacillota; Negativicutes; Selenomonadales; Sporomusaceae;
OC Thermosinus.
OX NCBI_TaxID=401526 {ECO:0000313|EMBL:EAX48616.1, ECO:0000313|Proteomes:UP000005139};
RN [1] {ECO:0000313|EMBL:EAX48616.1, ECO:0000313|Proteomes:UP000005139}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Nor1 {ECO:0000313|EMBL:EAX48616.1,
RC ECO:0000313|Proteomes:UP000005139};
RG US DOE Joint Genome Institute (JGI-ORNL);
RA Larimer F., Land M., Hauser L.;
RT "Annotation of the draft genome assembly of Thermosinus carboxydivorans
RT Nor1.";
RL Submitted (JAN-2007) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:EAX48616.1, ECO:0000313|Proteomes:UP000005139}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Nor1 {ECO:0000313|EMBL:EAX48616.1,
RC ECO:0000313|Proteomes:UP000005139};
RG US DOE Joint Genome Institute (JGI-PGF);
RA Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E.,
RA Tice H., Bruce D., Pitluck S., Richardson P.;
RT "Sequencing of the draft genome and assembly of Thermosinus carboxydivorans
RT Nor1.";
RL Submitted (JAN-2007) to the EMBL/GenBank/DDBJ databases.
CC -!- COFACTOR:
CC Name=a divalent metal cation; Xref=ChEBI:CHEBI:60240;
CC Evidence={ECO:0000256|ARBA:ARBA00001968};
CC -!- SIMILARITY: Belongs to the YicC/YloC family.
CC {ECO:0000256|ARBA:ARBA00035648}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EAX48616.1}.
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DR EMBL; AAWL01000002; EAX48616.1; -; Genomic_DNA.
DR RefSeq; WP_007288387.1; NZ_AAWL01000002.1.
DR AlphaFoldDB; A1HMY5; -.
DR eggNOG; COG1561; Bacteria.
DR OrthoDB; 9771229at2; -.
DR Proteomes; UP000005139; Unassembled WGS sequence.
DR GO; GO:0004521; F:RNA endonuclease activity; IEA:InterPro.
DR InterPro; IPR013551; YicC-like_C.
DR InterPro; IPR013527; YicC-like_N.
DR InterPro; IPR005229; YicC/YloC-like.
DR NCBIfam; TIGR00255; YicC/YloC family endoribonuclease; 1.
DR PANTHER; PTHR30636; UNCHARACTERIZED; 1.
DR PANTHER; PTHR30636:SF3; UPF0701 PROTEIN YICC; 1.
DR Pfam; PF08340; DUF1732; 1.
DR Pfam; PF03755; YicC_N; 1.
PE 3: Inferred from homology;
KW Endonuclease {ECO:0000256|ARBA:ARBA00022759};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Reference proteome {ECO:0000313|Proteomes:UP000005139}.
FT DOMAIN 2..156
FT /note="Endoribonuclease YicC-like N-terminal"
FT /evidence="ECO:0000259|Pfam:PF03755"
FT DOMAIN 210..294
FT /note="Endoribonuclease YicC-like C-terminal"
FT /evidence="ECO:0000259|Pfam:PF08340"
SQ SEQUENCE 294 AA; 33682 MW; F4B0840367369A71 CRC64;
MLKSMTGFGR GEYIDSNHRF TVEIKAVNHR YTEIGIRAPK NLSALEDKIR RSIAQSLFRG
RVDIYIAMEE FGEQRRMVRV DKELAMAYHN AMRELARLLN SSTVDFTPLI ARFPDVLKVE
EEEQDVLKLW PKLSEAMDAA IGNLLAMRLA EGANIQADLT MRIAKIETYV QQIEERMPEV
LEEYRAKLLA RMRDALTAIG VEPDETRLLQ EVACFADRTN IAEELVRLKS HLAQFRSTLD
VGEAVGRKLD FIVQEINRET NTIASKANDF TIANIVVEIK SEIEKVREQI QNIE
//