ID A1SN07_NOCSJ Unreviewed; 1282 AA.
AC A1SN07;
DT 06-FEB-2007, integrated into UniProtKB/TrEMBL.
DT 06-FEB-2007, sequence version 1.
DT 27-MAR-2024, entry version 97.
DE SubName: Full=ATP-dependent helicase HrpA {ECO:0000313|EMBL:ABL83192.1};
GN OrderedLocusNames=Noca_3692 {ECO:0000313|EMBL:ABL83192.1};
OS Nocardioides sp. (strain ATCC BAA-499 / JS614).
OC Bacteria; Actinomycetota; Actinomycetes; Propionibacteriales;
OC Nocardioidaceae; Nocardioides.
OX NCBI_TaxID=196162 {ECO:0000313|EMBL:ABL83192.1, ECO:0000313|Proteomes:UP000000640};
RN [1] {ECO:0000313|Proteomes:UP000000640}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-499 / JS614 {ECO:0000313|Proteomes:UP000000640};
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA Thompson L.S., Brettin T., Bruce D., Han C., Tapia R., Schmutz J.,
RA Larimer F., Land M., Hauser L., Kyrpides N., Kim E., Mattes T., Gossett J.,
RA Richardson P.;
RT "Complete sequence of chromosome 1 of Nocardioides sp. JS614.";
RL Submitted (DEC-2006) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:ABL83192.1, ECO:0000313|Proteomes:UP000000640}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-499 / JS614 {ECO:0000313|Proteomes:UP000000640};
RX PubMed=21551312; DOI=10.1128/JB.05109-11;
RA Coleman N.V., Wilson N.L., Barry K., Brettin T.S., Bruce D.C., Copeland A.,
RA Dalin E., Detter J.C., Del Rio T.G., Goodwin L.A., Hammon N.M., Han S.,
RA Hauser L.J., Israni S., Kim E., Kyrpides N., Land M.L., Lapidus A.,
RA Larimer F.W., Lucas S., Pitluck S., Richardson P., Schmutz J., Tapia R.,
RA Thompson S., Tice H.N., Spain J.C., Gossett J.G., Mattes T.E.;
RT "Genome Sequence of the ethene- and vinyl chloride-oxidizing actinomycete
RT Nocardioides sp. strain JS614.";
RL J. Bacteriol. 193:3399-3400(2011).
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DR EMBL; CP000509; ABL83192.1; -; Genomic_DNA.
DR RefSeq; WP_011757123.1; NC_008699.1.
DR STRING; 196162.Noca_3692; -.
DR KEGG; nca:Noca_3692; -.
DR eggNOG; COG1643; Bacteria.
DR HOGENOM; CLU_001832_3_1_11; -.
DR OrthoDB; 9805617at2; -.
DR Proteomes; UP000000640; Chromosome.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0003724; F:RNA helicase activity; IEA:InterPro.
DR CDD; cd17989; DEXHc_HrpA; 1.
DR CDD; cd18791; SF2_C_RHA; 1.
DR Gene3D; 1.20.120.1080; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR011709; DEAD-box_helicase_OB_fold.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR007502; Helicase-assoc_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR024590; HrpA_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR010222; RNA_helicase_HrpA.
DR NCBIfam; TIGR01967; DEAH_box_HrpA; 1.
DR PANTHER; PTHR18934; ATP-DEPENDENT RNA HELICASE; 1.
DR PANTHER; PTHR18934:SF83; PRE-MRNA-SPLICING FACTOR ATP-DEPENDENT RNA HELICASE DHX16; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF11898; DUF3418; 1.
DR Pfam; PF21010; HA2_C; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF07717; OB_NTP_bind; 1.
DR SMART; SM00382; AAA; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00847; HA2; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Helicase {ECO:0000313|EMBL:ABL83192.1};
KW Hydrolase {ECO:0000313|EMBL:ABL83192.1};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000000640}.
FT DOMAIN 23..186
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 222..389
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
SQ SEQUENCE 1282 AA; 143885 MW; 45DB70748AEC4EBD CRC64;
MSEELQIAYP PELPVTQRRE DIAAAIRDHQ VVIVAGETGS GKTTQLPKIC LELGRGSTGL
IGHTQPRRIA ARSVAERIAS ELGTELGDLV GYQVRFTDRT SRKSRVKLMT DGILLAELQR
DRQLRRYDTI IIDEAHERSL NIDFLLGYLK RLLPKRPDLK LIITSATIDV DRFAKHFDAP
VVEVSGRTYP VEIRYRPLMA FAPGEQSEDD EGEVIVRDQT EAIVEAIKEL SGEGPGDVLV
FLPGEREIRD TADALGDLPR TEILPLFSRL SAADQHRVFS SHGNATRRVV LATNVAETSL
TVPGIRYVVD TGVARISRYS VRTKVQRLPI EPISQASANQ RSGRCGRVEA GIAIRLYSQE
DFEGRPEFTD PEILRTNLAS VILQMTSLGL GDLARFPFVE PPDRRNVQAG VQLLEELGAL
STAAEPTARP PERAAKARGP RLTRIGQRLA RLPIDPRLAR MILEAERLGC VREVIVIAAA
LSLQDPRERP GADHPKEQAQ ADQLHARFKA EASDFLTWLN LWRYLKEQQK ELSSSAFRRM
CKREFLNYLR VREWQDFESQ LRQVCKEVGL TIGPERQRRS VAEGQTFQVV TEDADGIHQA
LLSGLLSHIG LLEEREKERR GPREYLGARG ARFAIFPGSG LHRKNPQFLM AGELVETSRL
WARQNAAIKP EWAERLGAHL VKRTYSEPHW SKKRASVMAF ERVTLYGVPL VADRPVAYGK
VDPALARELF IRHALVYGEW AAAEQGSHKF LETNRRLLEE AEELEHRARR RDIVVDEHTL
FDFYDARVGA DVVSGAHFDQ WWKRERQRNG RLLTFDPAML THDTVEEVSA ADYPEQWEGA
GLTFPISYHF EPGAAEDGLT IEVPVATLNR VEADDFSWNV PGLREELVTS LIRSLPKNLR
VSFVPAPNKA REFLAAVPPG EEPLLDALER WCRSTTGVVV PREAWDWGKV PEHLRPTYRV
VDDAGREQAR GKDLEALKAP LRPTFAAAIA EVAGDSGLAR TGETTWAFGE VPSSHTERRA
GHEVQVYPAL VDEGSAVGQQ VFGSTEEQEA RHRLGVRRLL LLELDSPVKR VLDGLTNAEK
LGLAGSPYPS VAELLEDCRA AVVGAAVDAR PPVRDEAAYV ALRAEAARDQ EAHLRAVMGD
VIRVLDAWRR TEKALSGRAD LPLLPALTDM RAQLGRLVHR GFVGEAGAAQ LRRYPVYLTA
LEQRRERLPG QVNRDRQLMD QLTELQDAYL HRLEALPPGR PPGERLRQVR WMLEEYRVSL
WAQQLGTPYP VSDQRIRRSL TP
//
